Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is yxeI [H]

Identifier: 192290477

GI number: 192290477

Start: 2257576

End: 2258643

Strand: Reverse

Name: yxeI [H]

Synonym: Rpal_2085

Alternate gene names: 192290477

Gene position: 2258643-2257576 (Counterclockwise)

Preceding gene: 192290491

Following gene: 192290476

Centisome position: 39.32

GC content: 63.67

Gene sequence:

>1068_bases
ATGATCGGTTTCAAGCGACGTCTCCTCACCACCTGCGCCGGCGCACTGGCCATCGCGGGATCGTTACTGCCGCCGGTCGC
CGACGCCTGCACCCGTCTAGTTTATCTCGGCGCCGACAATCAGGTGATCACGGCGCGATCGATGGATTGGGCGCGCGACA
TCGGCACCAATCTCTGGATCTTTCCACGCGGCATCAAGCGCTCCGGCGAGGCCGGCCCCAATTCGGCACAGTGGACCGCA
CGCTACGGCAGCGTGATCGCGTCGGCCTATGACGTCGCGACTTCGGACGGAATCAACGAGGCCGGGCTGGTCGCCAACGT
GCTGTGGCTGGCGGAATCGCAATATCCGCCGTTCGACGGCTCCAAGCCGGGGCTGGCGCTGTCGCTGTGGCCTCAATATG
CGCTCGACAATTTCGCCACCGTCGCCGAAGCGGTCGAGGCGCTGGCGAAGGAACCGTTCACGGTCGTCACAGACAAGATG
CCCGGTGAGCAGCGCCTTGCCACTGTGCACCTGGCGCTGTCGGACGCCTCCGGTGACAGCGCCATCATCGAATACATCGA
CGGCAAGCAGGTGATCCACCACGGCCGGCAATACCAAGTGATGACCAATTCGCCGACCTTCGATCAGCAGCTCGCGCTGA
ATTCGTACTGGCAGCAGATCGGTGGCACGGTGATGCTCCCAGGCACCAACCGCGCGGCCGATCGTTTCGCGCGGGCCTCG
TTCTATGTCGGCGCAATTCCTAAAACGCCCGACCCGGTGGAATCGATCGCCGCCGCGTTCAGCGTGATCCGCAACGCGTC
GGTGCCGTTCGGCATCTCGACGCCAGATCAGCCGAACATCTCGTCGACCCGCTGGCGCAGCGTCGCCGACCACAAGCGCA
AACTGTACTTCTTCGAATCCGCGCTGACGCCCAACGTGTTCTGGGTCGATCTCACCAAGATCGAGTTCGCGGCCGACAAG
GGCGTGGTGAAAAAGCTCGACCTCGGCCCCGGCCAGAGCAACGTCTTCTCGGGCGAGGTGCACGATCGCTTCAAGCCGGC
GGAGCCGTTCAAGTTTCAGGGACTGTGA

Upstream 100 bases:

>100_bases
CGTACCGCTGTCAACGCACGGATTCGCGGTATGATCACGTCATGGGAAGAATGTTCCGCATAGCAGAATACACCCACCCT
CGGGGTATCGGAGGTCCAAC

Downstream 100 bases:

>100_bases
GGCTGCGCTGAAAGCGCAGCAACACAATCAAGCTGCGCTTTCCGAGAATGGGCCACCAACATGGACCATCAGCGGCCTAG
CGCCTACATCGTCCGGGTAC

Product: Choloylglycine hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MIGFKRRLLTTCAGALAIAGSLLPPVADACTRLVYLGADNQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDVATSDGINEAGLVANVLWLAESQYPPFDGSKPGLALSLWPQYALDNFATVAEAVEALAKEPFTVVTDKM
PGEQRLATVHLALSDASGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNSYWQQIGGTVMLPGTNRAADRFARAS
FYVGAIPKTPDPVESIAAAFSVIRNASVPFGISTPDQPNISSTRWRSVADHKRKLYFFESALTPNVFWVDLTKIEFAADK
GVVKKLDLGPGQSNVFSGEVHDRFKPAEPFKFQGL

Sequences:

>Translated_355_residues
MIGFKRRLLTTCAGALAIAGSLLPPVADACTRLVYLGADNQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDVATSDGINEAGLVANVLWLAESQYPPFDGSKPGLALSLWPQYALDNFATVAEAVEALAKEPFTVVTDKM
PGEQRLATVHLALSDASGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNSYWQQIGGTVMLPGTNRAADRFARAS
FYVGAIPKTPDPVESIAAAFSVIRNASVPFGISTPDQPNISSTRWRSVADHKRKLYFFESALTPNVFWVDLTKIEFAADK
GVVKKLDLGPGQSNVFSGEVHDRFKPAEPFKFQGL
>Mature_355_residues
MIGFKRRLLTTCAGALAIAGSLLPPVADACTRLVYLGADNQVITARSMDWARDIGTNLWIFPRGIKRSGEAGPNSAQWTA
RYGSVIASAYDVATSDGINEAGLVANVLWLAESQYPPFDGSKPGLALSLWPQYALDNFATVAEAVEALAKEPFTVVTDKM
PGEQRLATVHLALSDASGDSAIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNSYWQQIGGTVMLPGTNRAADRFARAS
FYVGAIPKTPDPVESIAAAFSVIRNASVPFGISTPDQPNISSTRWRSVADHKRKLYFFESALTPNVFWVDLTKIEFAADK
GVVKKLDLGPGQSNVFSGEVHDRFKPAEPFKFQGL

Specific function: Unknown

COG id: COG3049

COG function: function code M; Penicillin V acylase and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C59 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003199 [H]

Pfam domain/function: PF02275 CBAH [H]

EC number: NA

Molecular weight: Translated: 38558; Mature: 38558

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFKRRLLTTCAGALAIAGSLLPPVADACTRLVYLGADNQVITARSMDWARDIGTNLWI
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCEEEECCCHHHHHCCCCEEE
FPRGIKRSGEAGPNSAQWTARYGSVIASAYDVATSDGINEAGLVANVLWLAESQYPPFDG
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
SKPGLALSLWPQYALDNFATVAEAVEALAKEPFTVVTDKMPGEQRLATVHLALSDASGDS
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEEEEEECCCCCC
AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNSYWQQIGGTVMLPGTNRAADRFARAS
EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH
FYVGAIPKTPDPVESIAAAFSVIRNASVPFGISTPDQPNISSTRWRSVADHKRKLYFFES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEC
ALTPNVFWVDLTKIEFAADKGVVKKLDLGPGQSNVFSGEVHDRFKPAEPFKFQGL
CCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEECCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIGFKRRLLTTCAGALAIAGSLLPPVADACTRLVYLGADNQVITARSMDWARDIGTNLWI
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCEEEECCCHHHHHCCCCEEE
FPRGIKRSGEAGPNSAQWTARYGSVIASAYDVATSDGINEAGLVANVLWLAESQYPPFDG
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC
SKPGLALSLWPQYALDNFATVAEAVEALAKEPFTVVTDKMPGEQRLATVHLALSDASGDS
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHEEEEEEEEECCCCCC
AIIEYIDGKQVIHHGRQYQVMTNSPTFDQQLALNSYWQQIGGTVMLPGTNRAADRFARAS
EEEEECCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHH
FYVGAIPKTPDPVESIAAAFSVIRNASVPFGISTPDQPNISSTRWRSVADHKRKLYFFES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEC
ALTPNVFWVDLTKIEFAADKGVVKKLDLGPGQSNVFSGEVHDRFKPAEPFKFQGL
CCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEECCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]