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The map label for this gene is 192290334

Identifier: 192290334

GI number: 192290334

Start: 2093716

End: 2094966

Strand: Reverse

Name: 192290334

Synonym: Rpal_1941

Alternate gene names: NA

Gene position: 2094966-2093716 (Counterclockwise)

Preceding gene: 192290336

Following gene: 192290333

Centisome position: 36.47

GC content: 62.51

Gene sequence:

>1251_bases
ATGTCTCCAGCCCCCTCGAATGTCCGTTCGTGGTCGATGCGCGCTGTGGTCGCCGCGACTGCGATCGGATTCGGTGCTTC
GTCGGCGCTCGCTGCCGACCCGATCAAGATCGGCGTGATCGCTGAAGCGCAGGCTATCGCCGGCGCTTCCATTCCGCAGG
CTGCGCAGCTCGCCGCTGAAGAAATCAACGCGAAAGGCGGCATCGACGGCCGCAAGATCGAGATCGTCAGCTACGACAAC
CACTCCTCGTCGGCCGATTCCGTGCGAGCGTTCCAGCGCGCCGTGAATGAAGACAAGGTCAACGCGGTGATCGCCAGCTA
CATCTCGGAAGTTGTGCTGGCGCTGATGCCGTGGGCCTCGCGGCTGAAAACGCCGTTCGTCACGCCGGGCGCGGCGTCCA
ACGAGATCACCAAGGCGATCAACAAGGACTACGAGAAGAACAAATACACCTTCCACGGCTATCTCACCTCCGGCGAGCTT
GCCCAGTCGGTGTGCGATGCAGCGAAGGACCTGTTGGTCGACGCCCGCCAGATGAAGAGCGCGGTGATCATGAGCGAGGA
CGCGGCCTGGACCAAGCCGCTCGACGTCGGCTACCAGGAGTGCCTGCCGAAGGTTGGGCTGAAGGTGCTCGACCACATCC
GGTTCTCGCCCGACACCACTGATTTCACGCCGATCTTCAATAAGATCGAAGGCTCAAAGCCGGACGTGATCATCACCGGC
ATCTCGCATGTCGGCGTCCAGCCGACGGTGCAGTGGAAGAACCAGCAGGTGCCGATCCCGATGTTCGGCATCGCCTCCCA
GGCGACCAACGAGACCTTCGGCAAGGACACCAACAACGCCTCCGACGGCGTGCTGTACCAGGGCGTGTCGGGCCCCGGCG
TCGCAGTGACCTCGAAGTCGGTGCCGTTCGCCGAGAATTTCAAGAAGAAGTACGGCAACTATCCGTCTTACGCCGGCTAC
ACCGCCTATGACGAGGTCTATTACATCGCCGAAGCGGTGAAGCGCGCCGGCTCCACCGACGGCGAGAAGCTGGTCGAAGC
GCTGGAAAAGACCGACTACGAAGGCACCATCGGCCGCGTCCAGTTCTACGGCAAGGACGAGCCGTTCACCCACGGCCTGA
AATACGGCAAGGGCCTGCTGACCGGTCTGATGCTGCAATGGCAGGACGGCAAGCAGGTCGCGGTGTGGCCGCCGGAAGTG
GCCAAAGCCAAGATCAAGTTCCCGGCGTTCATCAAGGCCGCCGCGAACTGA

Upstream 100 bases:

>100_bases
TGTGCTTGCCTGCGACAAAACGCGCGCTACACTTTTCGTGGCTGATCAACAAGCCGGCGGCCAACGCGCCCCCAAACAAA
GACAATAAAGAGGAAACGCC

Downstream 100 bases:

>100_bases
CCGCTTCAGCGAATGCTCCCGCCGCCAAGGACGGGAGCATTTTTCGTCCGGCTGCAAGCTTCTCCACATCGTCATTCCGG
GGCGCGGGCGACGCCCGCGA

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQAIAGASIPQAAQLAAEEINAKGGIDGRKIEIVSYDN
HSSSADSVRAFQRAVNEDKVNAVIASYISEVVLALMPWASRLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGEL
AQSVCDAAKDLLVDARQMKSAVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDFTPIFNKIEGSKPDVIITG
ISHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNASDGVLYQGVSGPGVAVTSKSVPFAENFKKKYGNYPSYAGY
TAYDEVYYIAEAVKRAGSTDGEKLVEALEKTDYEGTIGRVQFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPEV
AKAKIKFPAFIKAAAN

Sequences:

>Translated_416_residues
MSPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQAIAGASIPQAAQLAAEEINAKGGIDGRKIEIVSYDN
HSSSADSVRAFQRAVNEDKVNAVIASYISEVVLALMPWASRLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGEL
AQSVCDAAKDLLVDARQMKSAVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDFTPIFNKIEGSKPDVIITG
ISHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNASDGVLYQGVSGPGVAVTSKSVPFAENFKKKYGNYPSYAGY
TAYDEVYYIAEAVKRAGSTDGEKLVEALEKTDYEGTIGRVQFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPEV
AKAKIKFPAFIKAAAN
>Mature_415_residues
SPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQAIAGASIPQAAQLAAEEINAKGGIDGRKIEIVSYDNH
SSSADSVRAFQRAVNEDKVNAVIASYISEVVLALMPWASRLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGELA
QSVCDAAKDLLVDARQMKSAVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDFTPIFNKIEGSKPDVIITGI
SHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNASDGVLYQGVSGPGVAVTSKSVPFAENFKKKYGNYPSYAGYT
AYDEVYYIAEAVKRAGSTDGEKLVEALEKTDYEGTIGRVQFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPEVA
KAKIKFPAFIKAAAN

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 44691; Mature: 44560

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQAIAGASIPQAAQLAAE
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHH
EINAKGGIDGRKIEIVSYDNHSSSADSVRAFQRAVNEDKVNAVIASYISEVVLALMPWAS
HHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGELAQSVCDAAKDLLVDARQMKS
HHCCCCCCCCCCCHHHHHHHHCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDFTPIFNKIEGSKPDVIITG
HHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEC
ISHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNASDGVLYQGVSGPGVAVTSKS
CHHCCCCCEEEECCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEECCC
VPFAENFKKKYGNYPSYAGYTAYDEVYYIAEAVKRAGSTDGEKLVEALEKTDYEGTIGRV
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
QFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPEVAKAKIKFPAFIKAAAN
EEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHEEECCCHHHHCCCC
>Mature Secondary Structure 
SPAPSNVRSWSMRAVVAATAIGFGASSALAADPIKIGVIAEAQAIAGASIPQAAQLAAE
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHH
EINAKGGIDGRKIEIVSYDNHSSSADSVRAFQRAVNEDKVNAVIASYISEVVLALMPWAS
HHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
RLKTPFVTPGAASNEITKAINKDYEKNKYTFHGYLTSGELAQSVCDAAKDLLVDARQMKS
HHCCCCCCCCCCCHHHHHHHHCCHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
AVIMSEDAAWTKPLDVGYQECLPKVGLKVLDHIRFSPDTTDFTPIFNKIEGSKPDVIITG
HHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEC
ISHVGVQPTVQWKNQQVPIPMFGIASQATNETFGKDTNNASDGVLYQGVSGPGVAVTSKS
CHHCCCCCEEEECCCCCCCCHHCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEECCC
VPFAENFKKKYGNYPSYAGYTAYDEVYYIAEAVKRAGSTDGEKLVEALEKTDYEGTIGRV
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEE
QFYGKDEPFTHGLKYGKGLLTGLMLQWQDGKQVAVWPPEVAKAKIKFPAFIKAAAN
EEECCCCCHHHHHHHHHHHHHHHEEEECCCCEEEECCHHHHHEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA