Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290336

Identifier: 192290336

GI number: 192290336

Start: 2096286

End: 2097125

Strand: Reverse

Name: 192290336

Synonym: Rpal_1943

Alternate gene names: NA

Gene position: 2097125-2096286 (Counterclockwise)

Preceding gene: 192290337

Following gene: 192290334

Centisome position: 36.51

GC content: 68.69

Gene sequence:

>840_bases
ATGAAGGATTGGTACGCGGTCTTCGCCCTCGCGCTGGTCATCATCATCGGTTCTGCCGCAGGCCTCGTCGGCACGCTGGC
GTTCCTGCTGGCCTTCTTCGTTACCTGGTACTTGCTCTCTGCGCGCGAATTGGGCTTCGCCCAGGCGCGCGCCGCGTTCG
GCGTTCGGTTCGATCCGCCGATCTGGACGCGCAGCAACTGGCTGTGGCTCGAGCGGCTATTCGACGATAGCGACAAGCTG
TTGAAGGCCGCTGCGGTTGCGATGATCGTGATGGCCAGCACGCTGATGGTCGGCGCGCCGATCACCCTGCTCGTGGCCGT
GCTGATCGCCGCCTACCTGGCTTTCAGCATCCACCGCGACGGCCCAACACCGCCGCGCCGCGTGGTCCGGATTCACGATG
CCGGCGCAGACATCTCGGCGCACGCAAACCGGAACACTCCGATTCCGCCGCCAACCAACACGACGCAAGGTTCGGCCGTG
CAGGCTCCTACCGTGACGCCCGCTCAGCAAGTAGCGGAACCGGCCCCTCTCCTGCTGGGGCCGTTCACCCGCATCGTCGC
GCCGCGGCCGCGGCAGGTCACCAAACCGCGGCCCTCCCAGAACCGCCGTCCCGTCTCGCGTGGCGCCCGTAAGGCAGCAA
GCAAGCGTCAACAGCGTAAGGCGGCACGCAATCCGGCTCGCCCGCTTCCGCCGCTGCCGAGCCGCAAGCCCGGCTACGCG
ATCGCGCTGAAGCCGCGCCGTCCGTTGCGGCAGCCGCCGCAGCTCCGGCAACGGCGCCGCCTTCGGAGGCCGATGACGCT
GATGCGGGCAAGCGCCGCGGGTTCGTCACCGACCCGCTGA

Upstream 100 bases:

>100_bases
CCAGCCTGCCTCCGCCACACAGGTGTCGCGGCCTGATCCGAATCAACGGCACGCAAACTAAGTCTGTGCGATACTTAGCG
AATCGCACGGAGTCATTCCC

Downstream 100 bases:

>100_bases
CGGCGGCTTCTGCGCGCTCCCCTAACGGAGCGCTTACTCCACCATCTCGGACACGCCCTTGCCGCAGGCCGAGGTGTCGG
CCTGACCACCGAGATCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKDWYAVFALALVIIIGSAAGLVGTLAFLLAFFVTWYLLSARELGFAQARAAFGVRFDPPIWTRSNWLWLERLFDDSDKL
LKAAAVAMIVMASTLMVGAPITLLVAVLIAAYLAFSIHRDGPTPPRRVVRIHDAGADISAHANRNTPIPPPTNTTQGSAV
QAPTVTPAQQVAEPAPLLLGPFTRIVAPRPRQVTKPRPSQNRRPVSRGARKAASKRQQRKAARNPARPLPPLPSRKPGYA
IALKPRRPLRQPPQLRQRRRLRRPMTLMRASAAGSSPTR

Sequences:

>Translated_279_residues
MKDWYAVFALALVIIIGSAAGLVGTLAFLLAFFVTWYLLSARELGFAQARAAFGVRFDPPIWTRSNWLWLERLFDDSDKL
LKAAAVAMIVMASTLMVGAPITLLVAVLIAAYLAFSIHRDGPTPPRRVVRIHDAGADISAHANRNTPIPPPTNTTQGSAV
QAPTVTPAQQVAEPAPLLLGPFTRIVAPRPRQVTKPRPSQNRRPVSRGARKAASKRQQRKAARNPARPLPPLPSRKPGYA
IALKPRRPLRQPPQLRQRRRLRRPMTLMRASAAGSSPTR
>Mature_279_residues
MKDWYAVFALALVIIIGSAAGLVGTLAFLLAFFVTWYLLSARELGFAQARAAFGVRFDPPIWTRSNWLWLERLFDDSDKL
LKAAAVAMIVMASTLMVGAPITLLVAVLIAAYLAFSIHRDGPTPPRRVVRIHDAGADISAHANRNTPIPPPTNTTQGSAV
QAPTVTPAQQVAEPAPLLLGPFTRIVAPRPRQVTKPRPSQNRRPVSRGARKAASKRQQRKAARNPARPLPPLPSRKPGYA
IALKPRRPLRQPPQLRQRRRLRRPMTLMRASAAGSSPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30633; Mature: 30633

Theoretical pI: Translated: 12.56; Mature: 12.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDWYAVFALALVIIIGSAAGLVGTLAFLLAFFVTWYLLSARELGFAQARAAFGVRFDPP
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IWTRSNWLWLERLFDDSDKLLKAAAVAMIVMASTLMVGAPITLLVAVLIAAYLAFSIHRD
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
GPTPPRRVVRIHDAGADISAHANRNTPIPPPTNTTQGSAVQAPTVTPAQQVAEPAPLLLG
CCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHH
PFTRIVAPRPRQVTKPRPSQNRRPVSRGARKAASKRQQRKAARNPARPLPPLPSRKPGYA
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
IALKPRRPLRQPPQLRQRRRLRRPMTLMRASAAGSSPTR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKDWYAVFALALVIIIGSAAGLVGTLAFLLAFFVTWYLLSARELGFAQARAAFGVRFDPP
CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IWTRSNWLWLERLFDDSDKLLKAAAVAMIVMASTLMVGAPITLLVAVLIAAYLAFSIHRD
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
GPTPPRRVVRIHDAGADISAHANRNTPIPPPTNTTQGSAVQAPTVTPAQQVAEPAPLLLG
CCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHH
PFTRIVAPRPRQVTKPRPSQNRRPVSRGARKAASKRQQRKAARNPARPLPPLPSRKPGYA
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
IALKPRRPLRQPPQLRQRRRLRRPMTLMRASAAGSSPTR
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA