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The map label for this gene is ygaD [C]

Identifier: 192290290

GI number: 192290290

Start: 2042527

End: 2043015

Strand: Reverse

Name: ygaD [C]

Synonym: Rpal_1897

Alternate gene names: 192290290

Gene position: 2043015-2042527 (Counterclockwise)

Preceding gene: 192290291

Following gene: 192290288

Centisome position: 35.57

GC content: 68.1

Gene sequence:

>489_bases
ATGCGGGAATTGCTGCCGGTGGCCGAAAAGGTCGCGCTCAGGCTGATCGCGCAGAAGCAGACCATCGCAGTGGCTGAATC
CTCGGCCGGCGGATTGATCGCGTCTGCGCTGCTCGCCGTGCCCGGCGCATCGGCGTACTTTCTCGGCTCTGCGGTGGTGT
ACACCCGCGAGGCACGACGTGTGCTGATGGACATCCCGGATCCCGACATGAAGGGGCTGCGGTCGTCGTCGGAGCCCTAT
GCCGAATTGCTGGCGAAGCAGATCCGCTCCCGGCTCGGCGCCGACTGGGCACTGTCGGAAACCGGCGCCGCCGGCCCCTC
GGGCAACCGCTACGGCGACGCCGCCGGCCACACCTGCATCGCGGTGGCCGGGCCGCGGCAGGCGGTGATGACGCTGGAGA
CGGAAAGCGCCGACCGCGTCGAGAACATGCACGTGTTCGCCGCGACCGCGCTGACGTTTTTGCTGCGAATGATGACGCCG
ATCGGGTGA

Upstream 100 bases:

>100_bases
ATTCGGTTTGCCCGCTGGCACAGCTTCCGATCAAGTACAGCCGATCATGTGTCGATTCGTCCCGCCAAAGGCGACGCAGG
CAGCACAGAGGAGATCGGTA

Downstream 100 bases:

>100_bases
CGCAAGCTCGAAGCCGGCCGATTTAAATCCGTGATGTTCCACGTCATTGACCCGCACGGGACGGCCTCACTCCCAGGGCT
CGCCGATAAGGGCTGCGCTT

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRELLPVAEKVALRLIAQKQTIAVAESSAGGLIASALLAVPGASAYFLGSAVVYTREARRVLMDIPDPDMKGLRSSSEPY
AELLAKQIRSRLGADWALSETGAAGPSGNRYGDAAGHTCIAVAGPRQAVMTLETESADRVENMHVFAATALTFLLRMMTP
IG

Sequences:

>Translated_162_residues
MRELLPVAEKVALRLIAQKQTIAVAESSAGGLIASALLAVPGASAYFLGSAVVYTREARRVLMDIPDPDMKGLRSSSEPY
AELLAKQIRSRLGADWALSETGAAGPSGNRYGDAAGHTCIAVAGPRQAVMTLETESADRVENMHVFAATALTFLLRMMTP
IG
>Mature_162_residues
MRELLPVAEKVALRLIAQKQTIAVAESSAGGLIASALLAVPGASAYFLGSAVVYTREARRVLMDIPDPDMKGLRSSSEPY
AELLAKQIRSRLGADWALSETGAAGPSGNRYGDAAGHTCIAVAGPRQAVMTLETESADRVENMHVFAATALTFLLRMMTP
IG

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 17087; Mature: 17087

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELLPVAEKVALRLIAQKQTIAVAESSAGGLIASALLAVPGASAYFLGSAVVYTREARR
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLMDIPDPDMKGLRSSSEPYAELLAKQIRSRLGADWALSETGAAGPSGNRYGDAAGHTCI
HHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AVAGPRQAVMTLETESADRVENMHVFAATALTFLLRMMTPIG
EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRELLPVAEKVALRLIAQKQTIAVAESSAGGLIASALLAVPGASAYFLGSAVVYTREARR
CCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLMDIPDPDMKGLRSSSEPYAELLAKQIRSRLGADWALSETGAAGPSGNRYGDAAGHTCI
HHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AVAGPRQAVMTLETESADRVENMHVFAATALTFLLRMMTPIG
EEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA