| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192290291
Identifier: 192290291
GI number: 192290291
Start: 2043133
End: 2043876
Strand: Reverse
Name: 192290291
Synonym: Rpal_1898
Alternate gene names: NA
Gene position: 2043876-2043133 (Counterclockwise)
Preceding gene: 192290293
Following gene: 192290290
Centisome position: 35.58
GC content: 65.86
Gene sequence:
>744_bases ATGGAACTAACACCCCTCATCATCCTGATCGCTGGGGCGCTGTGTGGCGGGTTCGTCTCCGGCCTCTCGGGCTTCGGCCT GGCGCTGGTCTCGCTGGGGTTCTGGCTATACGTCTTCCCGCCGACCGTCGCCGTACCGCTGGTGCTGCTGTGCTCGATGG CTTCGCAAGCCTCGACCATGCGGATGGTGTGGCAGCACATCGATTTCAAACTAGTGACGCCGTTCCTGATCGGCGGGCTC GCCGGCGTGATCCCGGGCAGCGTGCTGGTGGCGTATGCCGACCCGTGGGGCTTCAAGCTGTTCGTCGGTCTGTTTCTGCT GATCTTCCCGCCTGCGCTGTATTTCACCCCGCCGATGGCACTGACCTTCGGCGGCCGCTGGATGGATGGCGTGATCGGCT GGATCGGCGGCGTGATGGGCGGCTTCGCCGGGTTGTCCGGCCCTCCACCGATTCTATGGGCGAGCGTCCGCGGCTGGGAC AAACATCAGCGCCGCGGCGTGTTTCAGGCGTTCAACTCCACCGTCCTGATCGCCGCGCTAGCGCTGCAGACCGCGCACGG CCTCGTCACGCGTGACGTTCTTTACGCGGCGGTGTTGGCGCTGCCGGCAATCCTGCTGGGCGCCTGGCTCGGCGCGCGGA CCTATCACGCGCTGAGCGACCGCTCGTTTCGCAATGTGGTGCTGGCGCTGCTGTTTCTATCCGGGCTCACGCTGGTTTGG AGCAGCTTCGCCGGACTGCGCTGA
Upstream 100 bases:
>100_bases GCCCGATCGACAGGCGGCACAAAGCAAGCCTGCATCGACACCCCTTCACGGACGCGCGACGGCTTCCGCCTGACGGAATT GCGCAGGCGCATCGAGGCCG
Downstream 100 bases:
>100_bases GCGGCCCGGCCGCTCACATTCGGTTTGCCCGCTGGCACAGCTTCCGATCAAGTACAGCCGATCATGTGTCGATTCGTCCC GCCAAAGGCGACGCAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAVPLVLLCSMASQASTMRMVWQHIDFKLVTPFLIGGL AGVIPGSVLVAYADPWGFKLFVGLFLLIFPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWD KHQRRGVFQAFNSTVLIAALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTLVW SSFAGLR
Sequences:
>Translated_247_residues MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAVPLVLLCSMASQASTMRMVWQHIDFKLVTPFLIGGL AGVIPGSVLVAYADPWGFKLFVGLFLLIFPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWD KHQRRGVFQAFNSTVLIAALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTLVW SSFAGLR >Mature_247_residues MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAVPLVLLCSMASQASTMRMVWQHIDFKLVTPFLIGGL AGVIPGSVLVAYADPWGFKLFVGLFLLIFPPALYFTPPMALTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWD KHQRRGVFQAFNSTVLIAALALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTLVW SSFAGLR
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26364; Mature: 26364
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAVPLVLLCSMASQASTM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RMVWQHIDFKLVTPFLIGGLAGVIPGSVLVAYADPWGFKLFVGLFLLIFPPALYFTPPMA HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCHHHHHCCCHH LTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVFQAFNSTVLIAAL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH ALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SSFAGLR HHHCCCC >Mature Secondary Structure MELTPLIILIAGALCGGFVSGLSGFGLALVSLGFWLYVFPPTVAVPLVLLCSMASQASTM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RMVWQHIDFKLVTPFLIGGLAGVIPGSVLVAYADPWGFKLFVGLFLLIFPPALYFTPPMA HHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCHHHHHCCCHH LTFGGRWMDGVIGWIGGVMGGFAGLSGPPPILWASVRGWDKHQRRGVFQAFNSTVLIAAL HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH ALQTAHGLVTRDVLYAAVLALPAILLGAWLGARTYHALSDRSFRNVVLALLFLSGLTLVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SSFAGLR HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA