| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289884
Identifier: 192289884
GI number: 192289884
Start: 1556196
End: 1556669
Strand: Reverse
Name: 192289884
Synonym: Rpal_1474
Alternate gene names: NA
Gene position: 1556669-1556196 (Counterclockwise)
Preceding gene: 192289885
Following gene: 192289880
Centisome position: 27.1
GC content: 62.24
Gene sequence:
>474_bases ATGAGTAAGCCGGAATTCGCCTACGTCACCTATATCCGCACCACGCCAGACCGGTTGTGGCACGCCTTGACCGACGCCGA TTTCACCCGGCGCTACTGGATGGACTGCACGCTGCGCTCGGACTGGACCGTCGGCTCCGAAATGACGATCGAGCGCGGCG GCGAGGTCAAGAACCGCTGCACTATCGTGGAGTCCGATCCGCCGCATCGGCTCGCGTACGATTGGGTCTCGGTGTGGGAT CCGGGGATGCGCCAGGAGAAACCGTCACGCGTGACCTACGAGATCGAACCGCAAGGCGACCTCATCAAGCTCACGGTCAC GCACCAGAACTTCACCCAAGGCAGCACGACGCTGCCAAGCATCAGCTTTGGCTGGCCAATGGTGCTGGCGAGCCTGAAGA GCATTTTGGAAACCGGCCAGCCGCTACCATTCGCTCCGCAGTCGCACGCGGCGGCGGAATCCGCTCATGTGTAA
Upstream 100 bases:
>100_bases CCGATGCCGATCCATGAGATCGGCGAACGCTGGATCAGGAAATTCGAGCGCGGCCGGCTCGCCGCCCTCAGCGACCTGAA ACGCAAACTGGAGACGCGCG
Downstream 100 bases:
>100_bases GCCGTAACCGGGTCACATTGCCTGCGGCAAAGCTTGTCCGGAAACAGCTTAGTTTCCTCACGGAGCCGTCGTGGCCGGGC CTGTCCCGGCCATCAACCGT
Product: Activator of Hsp90 ATPase 1 family protein
Products: NA
Alternate protein names: Activator Of; Transcriptional Regulator ArsR Family; Transcriptional Regulator; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Regulatory Protein; ArsR Family xin-Antitoxin System Antitoxin Component
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRCTIVESDPPHRLAYDWVSVWD PGMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPSISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV
Sequences:
>Translated_157_residues MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRCTIVESDPPHRLAYDWVSVWD PGMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPSISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV >Mature_156_residues SKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRCTIVESDPPHRLAYDWVSVWDP GMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPSISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV
Specific function: Unknown
COG id: COG3832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17872; Mature: 17741
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRC CCCCCEEEEEEEEECHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCEE TIVESDPPHRLAYDWVSVWDPGMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPS EEEECCCCCCEEEHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC ISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRC CCCCEEEEEEEEECHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCEE TIVESDPPHRLAYDWVSVWDPGMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPS EEEECCCCCCEEEHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCC ISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAHV CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA