| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289885
Identifier: 192289885
GI number: 192289885
Start: 1556662
End: 1556976
Strand: Reverse
Name: 192289885
Synonym: Rpal_1475
Alternate gene names: NA
Gene position: 1556976-1556662 (Counterclockwise)
Preceding gene: 192289887
Following gene: 192289884
Centisome position: 27.11
GC content: 63.17
Gene sequence:
>315_bases ATGGATGAGGTCTTCAAAGCGCTGGCAGATGGTTCGCGGCGCGCCCTTTTGGACCGGCTCCACGCCCGCAACGGGCAGAC GCTGAGCGATCTCTGCGACGGCCTCGCGATGACGCGGCAGGCCGTAACCAAGCACCTTGCGATTCTCGAAGCGGCCAATC TGGTCGCCACGGTCAAACACGGCCGCGAGAAGCTCCACTACCTGAACCCGATGCCGATCCATGAGATCGGCGAACGCTGG ATCAGGAAATTCGAGCGCGGCCGGCTCGCCGCCCTCAGCGACCTGAAACGCAAACTGGAGACGCGCGATGAGTAA
Upstream 100 bases:
>100_bases CGAGACGATACCAGCCCTGCGCGACTGCGACGACTGGCGAAAAGGCCGCGTCGATGGTCGGTGTTGACAAGCAACCTTTT GGTTGCCTATTATCGCCGCC
Downstream 100 bases:
>100_bases GCCGGAATTCGCCTACGTCACCTATATCCGCACCACGCCAGACCGGTTGTGGCACGCCTTGACCGACGCCGATTTCACCC GGCGCTACTGGATGGACTGC
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Activator Of; Regulatory Protein; ArsR Family xin-Antitoxin System Antitoxin Component; Transcription Regulator Protein; ArsR Family Regulatory Protein; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Protein ArsR Family; Helix-Turn-Helix Type; Transcriptional Regulator Arsr Family; Arsr Family Transcriptional Regulator
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW IRKFERGRLAALSDLKRKLETRDE
Sequences:
>Translated_104_residues MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW IRKFERGRLAALSDLKRKLETRDE >Mature_104_residues MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW IRKFERGRLAALSDLKRKLETRDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11869; Mature: 11869
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKH CHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GREKLHYLNPMPIHEIGERWIRKFERGRLAALSDLKRKLETRDE HHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKH CHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GREKLHYLNPMPIHEIGERWIRKFERGRLAALSDLKRKLETRDE HHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA