Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

Click here to switch to the map view.

The map label for this gene is 192289885

Identifier: 192289885

GI number: 192289885

Start: 1556662

End: 1556976

Strand: Reverse

Name: 192289885

Synonym: Rpal_1475

Alternate gene names: NA

Gene position: 1556976-1556662 (Counterclockwise)

Preceding gene: 192289887

Following gene: 192289884

Centisome position: 27.11

GC content: 63.17

Gene sequence:

>315_bases
ATGGATGAGGTCTTCAAAGCGCTGGCAGATGGTTCGCGGCGCGCCCTTTTGGACCGGCTCCACGCCCGCAACGGGCAGAC
GCTGAGCGATCTCTGCGACGGCCTCGCGATGACGCGGCAGGCCGTAACCAAGCACCTTGCGATTCTCGAAGCGGCCAATC
TGGTCGCCACGGTCAAACACGGCCGCGAGAAGCTCCACTACCTGAACCCGATGCCGATCCATGAGATCGGCGAACGCTGG
ATCAGGAAATTCGAGCGCGGCCGGCTCGCCGCCCTCAGCGACCTGAAACGCAAACTGGAGACGCGCGATGAGTAA

Upstream 100 bases:

>100_bases
CGAGACGATACCAGCCCTGCGCGACTGCGACGACTGGCGAAAAGGCCGCGTCGATGGTCGGTGTTGACAAGCAACCTTTT
GGTTGCCTATTATCGCCGCC

Downstream 100 bases:

>100_bases
GCCGGAATTCGCCTACGTCACCTATATCCGCACCACGCCAGACCGGTTGTGGCACGCCTTGACCGACGCCGATTTCACCC
GGCGCTACTGGATGGACTGC

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Activator Of; Regulatory Protein; ArsR Family xin-Antitoxin System Antitoxin Component; Transcription Regulator Protein; ArsR Family Regulatory Protein; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator Protein ArsR Family; Helix-Turn-Helix Type; Transcriptional Regulator Arsr Family; Arsr Family Transcriptional Regulator

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW
IRKFERGRLAALSDLKRKLETRDE

Sequences:

>Translated_104_residues
MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW
IRKFERGRLAALSDLKRKLETRDE
>Mature_104_residues
MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKHGREKLHYLNPMPIHEIGERW
IRKFERGRLAALSDLKRKLETRDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11869; Mature: 11869

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKH
CHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREKLHYLNPMPIHEIGERWIRKFERGRLAALSDLKRKLETRDE
HHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDEVFKALADGSRRALLDRLHARNGQTLSDLCDGLAMTRQAVTKHLAILEAANLVATVKH
CHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREKLHYLNPMPIHEIGERWIRKFERGRLAALSDLKRKLETRDE
HHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA