Click here to switch to the map view.

The map label for this gene is istB [H]

Identifier: 192289465

GI number: 192289465

Start: 1102411

End: 1103274

Strand: Reverse

Name: istB [H]

Synonym: Rpal_1038

Alternate gene names: 192289465

Gene position: 1103274-1102411 (Counterclockwise)

Preceding gene: 192289466

Following gene: 192289455

Centisome position: 19.21

GC content: 62.15

Gene sequence:

>864_bases
ATGGAACGCACTCAACTCTTCGACTTGATGAGCGAACTCAAGCTGTACGGCATGAAGGCCGCCTTCGACGAGATCATGGC
CACCGCGGTCAAGCGCCAACACGAACCTCAGCGCATCGTCGGCGACTTGCTCAGTGCCGAGATCAACGAGAAGCACGCGC
GCTCGATCAAATACCAACTCACCATCGCTAAACTGCCGCTCGCCAAGGACATAGACGACTTCCAGTTCGAAGGGACCCCG
ATCAACCAGACCCTGGTCAAGGACCTGGCGGGCGGCGGGTTCATCGCCCAGCAACGCAACGTCGTGCTGATCGGCGGCAC
CGGCACCGGCAAGACCCATCTGGCCATCGCCATCGCCCGGAACTGCATCCGGGCCGGCGCCCGAGCCCGGTTCTACAACG
TGGTCGATCTCGTCAATCGGCTCGAGACCGAAGCTCGCAACGGCAAGCAGGGGCAGATCGCAGAGCACTTGACCCGGATG
GACTTCGTTGTCCTCGACGAACTGGGCTATCTGCCGTTCGCCCAGGCCGGCGGCCAGCTCCTGTTCCACCTGATCAGTCG
CCTCTACGAGCGCACCTCGATTATCGTCACCACCAACCTGGCGTTCGGCGAGTGGCCCAGCGTGTTCGGCGACGCCAAAA
TGACGACCGCATTGCTCGATCGGCTGACCCACCACTGTGACATCGTCGAAACCGGTAACGACAGTTGGCGGTTCAAAAGC
CGAGACGACGATCACACCGCCCGCGCTCGCCACGTCTCCACAACCCCGACCAGCTCCGACGCGGCGAGCGCTACCGCCCA
AACCCGTCGCTCAAGGGGGTCAAAATTGGACGCCGATACGGGGTCAAATTTGCGCGCCGATTGA

Upstream 100 bases:

>100_bases
CAGCGCCGCCGGCCAACATCCTCACCCCCGCGGCGCTGGCGCTGCGTTACGCGCCCATCGCCGATTGTGCCCGCTACGAC
AACCTCCGGAGGATGGTCTG

Downstream 100 bases:

>100_bases
CACATAGTGGGCGATGTTCGGAAATAGAGGCGTCGGCTCCATCTTCGTCGATATCCGGTTATCGATGAAGCGCTCCTGAG
ACTTGTCCTGCGCCCAGACG

Product: IstB domain-containing protein ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MERTQLFDLMSELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLSAEINEKHARSIKYQLTIAKLPLAKDIDDFQFEGTP
INQTLVKDLAGGGFIAQQRNVVLIGGTGTGKTHLAIAIARNCIRAGARARFYNVVDLVNRLETEARNGKQGQIAEHLTRM
DFVVLDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKS
RDDDHTARARHVSTTPTSSDAASATAQTRRSRGSKLDADTGSNLRAD

Sequences:

>Translated_287_residues
MERTQLFDLMSELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLSAEINEKHARSIKYQLTIAKLPLAKDIDDFQFEGTP
INQTLVKDLAGGGFIAQQRNVVLIGGTGTGKTHLAIAIARNCIRAGARARFYNVVDLVNRLETEARNGKQGQIAEHLTRM
DFVVLDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKS
RDDDHTARARHVSTTPTSSDAASATAQTRRSRGSKLDADTGSNLRAD
>Mature_287_residues
MERTQLFDLMSELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLSAEINEKHARSIKYQLTIAKLPLAKDIDDFQFEGTP
INQTLVKDLAGGGFIAQQRNVVLIGGTGTGKTHLAIAIARNCIRAGARARFYNVVDLVNRLETEARNGKQGQIAEHLTRM
DFVVLDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKS
RDDDHTARARHVSTTPTSSDAASATAQTRRSRGSKLDADTGSNLRAD

Specific function: One of two proteins expressed only when there is a tandem repeat of the IS21 insertion sequence, it is necessary for the transposition of plasmids with that tandem repeat [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 31800; Mature: 31800

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTQLFDLMSELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLSAEINEKHARSIKYQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHEEEEE
TIAKLPLAKDIDDFQFEGTPINQTLVKDLAGGGFIAQQRNVVLIGGTGTGKTHLAIAIAR
EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHH
NCIRAGARARFYNVVDLVNRLETEARNGKQGQIAEHLTRMDFVVLDELGYLPFAQAGGQL
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKS
HHHHHHHHHHCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCEEECCCCCCEECC
RDDDHTARARHVSTTPTSSDAASATAQTRRSRGSKLDADTGSNLRAD
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERTQLFDLMSELKLYGMKAAFDEIMATAVKRQHEPQRIVGDLLSAEINEKHARSIKYQL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHEEEEE
TIAKLPLAKDIDDFQFEGTPINQTLVKDLAGGGFIAQQRNVVLIGGTGTGKTHLAIAIAR
EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHH
NCIRAGARARFYNVVDLVNRLETEARNGKQGQIAEHLTRMDFVVLDELGYLPFAQAGGQL
HHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LFHLISRLYERTSIIVTTNLAFGEWPSVFGDAKMTTALLDRLTHHCDIVETGNDSWRFKS
HHHHHHHHHHCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCEEECCCCCCEECC
RDDDHTARARHVSTTPTSSDAASATAQTRRSRGSKLDADTGSNLRAD
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2540414 [H]