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The map label for this gene is nmoT [H]

Identifier: 192289466

GI number: 192289466

Start: 1103274

End: 1104764

Strand: Reverse

Name: nmoT [H]

Synonym: Rpal_1039

Alternate gene names: 192289466

Gene position: 1104764-1103274 (Counterclockwise)

Preceding gene: 192289467

Following gene: 192289465

Centisome position: 19.23

GC content: 64.65

Gene sequence:

>1491_bases
GTGGAGACGGTCGCTCGGATTCGGCGTGAGCATTTTCTCAAGGGCAAGACGATCAAGGAGATCGTCCGGGACCTGAAGGT
GTCGCGGAACACGGTCCGCAAAGTGCTGCGTTCCGGTGAGACGTCATTCGAGTATGAGCGCGAAGTTCAGCCGCGACCGA
AGCTTGGGCGGTGGACGGCCGAGCTGGATGAACTGCTCTCGACGAACGCCACCAAGGCAGCTCGCGAGCAGTTGACGTTG
ATCCGGATCTTCGAGGAACTGCGCGGGCGCGGTTATGACGGCGGCTACGATGCCGTGCGCCGCTTCGCCCGGCGCTGGGC
CAAGGAGCGCGGCCAGGCGACGGCCGCAGCTTACGTACCGCTGAGCTTCGCGCCGGGAGAAGCCTACCAGTTCGACTGGA
GCCACGAGATCGTCCTGTTTGGCGGGGTGACGACGATCGTGAAGGTCGCCCACGTCCGGCTCTGCCACAGCCGGATGTTG
TTCGTGCGGGCCTATCCGCGCGAGACCCAGGAGATGGTGTTCGACGCTCATGACCGGGCGTTCGCCTTGTTCAAGGGAAC
CTGCGGACGCGGCATCTACGACAACATGAAGACGGCGGTGGAGACGATCTTCGTCGGCAAGGACCGTCTCTATAATCGCC
GCTTCATGCAGATGTGCAGCCACTACCTGATCGAGCCGGTCGCATGCACGCCGGCGTCTGGCTGGGAGAAGGGTCAGGTC
GAGAACCAGGTCGGCCTGGTGCGTGAGCGATTCTTCACGCCGCGGCTGCGTTTCAGGAGCTACGACGAGTTGAACGCCTG
GCTCACGGACAAATGCATCGCCTACGCCAAAGCCCATCGCCACCCAGAGCTGACCGAGCAGACGATCTGGGAGGTGTTCG
AAGCCGAGCGACCAAAGCTCGTTCCCTATGCCGGCCGGTTCGATGGATTCCACGCGGTGCCGACCTCGGTCTCGAAGACC
TGCCTGGTGCGCTTCGACAACAACAAATACTCGGTCGCCGCCAGCGCGGTCGGTCGACCGGTCGAGGTGCATGCTTATGC
CGACCGCATCGTCATCCGCCAGGACGGCCGCGTCGTTGCCGAACATCCTCGCTCGTTCGGTCGCGGCGAGACCACCTACG
ATCCCTGGCATTACGTTCCCGTGCTGGCGCGCAAGCCGGGCGCCTTGCGCAACGGCGCGCCGTTCAAGGATTGGGTGCTA
CCGGCAGCGATGGAACGCGTCAGGCGCAAGCTTGCCGGTGTTGCCGACGGCAACCGGCAGATGGTCGATATCCTCAATGC
GGTGCTGACCGATGGCCTGGCGGCGGTCGAAGCCGCCTGTGTCGAGGCGATCGCGCACGGCGTCCATTCCGCCGACGTCA
TCCTCAACATCCTCGCTCGCCGGCGCGATCCAGCGCCGCCGGCCAACATCCTCACCCCCGCGGCGCTGGCGCTGCGTTAC
GCGCCCATCGCCGATTGTGCCCGCTACGACAACCTCCGGAGGATGGTCTGA

Upstream 100 bases:

>100_bases
TTTTGACCCCCTGAGCCGGGGGATCGGCGTCCAAAATTGACCCCCTCCCATTCCACGCTACCCGCTTTGGCTCGAAGCGG
GTGGTGGAGGAATGCTGACA

Downstream 100 bases:

>100_bases
TGGAACGCACTCAACTCTTCGACTTGATGAGCGAACTCAAGCTGTACGGCATGAAGGCCGCCTTCGACGAGATCATGGCC
ACCGCGGTCAAGCGCCAACA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTAELDELLSTNATKAAREQLTL
IRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVPLSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRML
FVRAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV
ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKLVPYAGRFDGFHAVPTSVSKT
CLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVL
PAAMERVRRKLAGVADGNRQMVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY
APIADCARYDNLRRMV

Sequences:

>Translated_496_residues
METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTAELDELLSTNATKAAREQLTL
IRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVPLSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRML
FVRAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV
ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKLVPYAGRFDGFHAVPTSVSKT
CLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVL
PAAMERVRRKLAGVADGNRQMVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY
APIADCARYDNLRRMV
>Mature_496_residues
METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTAELDELLSTNATKAAREQLTL
IRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVPLSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRML
FVRAYPRETQEMVFDAHDRAFALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV
ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKLVPYAGRFDGFHAVPTSVSKT
CLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVAEHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVL
PAAMERVRRKLAGVADGNRQMVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY
APIADCARYDNLRRMV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 56375; Mature: 56375

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHH
ELDELLSTNATKAAREQLTLIRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
LSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRMLFVRAYPRETQEMVFDAHDRA
EEECCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCE
FALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV
EEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKL
HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
VPYAGRFDGFHAVPTSVSKTCLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVA
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCEEEEEECCEEEEECCCCEEE
EHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVLPAAMERVRRKLAGVADGNRQ
CCCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH
MVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
APIADCARYDNLRRMV
CCHHHHHHHHHHHHCC
>Mature Secondary Structure
METVARIRREHFLKGKTIKEIVRDLKVSRNTVRKVLRSGETSFEYEREVQPRPKLGRWTA
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHH
ELDELLSTNATKAAREQLTLIRIFEELRGRGYDGGYDAVRRFARRWAKERGQATAAAYVP
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEE
LSFAPGEAYQFDWSHEIVLFGGVTTIVKVAHVRLCHSRMLFVRAYPRETQEMVFDAHDRA
EEECCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCE
FALFKGTCGRGIYDNMKTAVETIFVGKDRLYNRRFMQMCSHYLIEPVACTPASGWEKGQV
EEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
ENQVGLVRERFFTPRLRFRSYDELNAWLTDKCIAYAKAHRHPELTEQTIWEVFEAERPKL
HHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
VPYAGRFDGFHAVPTSVSKTCLVRFDNNKYSVAASAVGRPVEVHAYADRIVIRQDGRVVA
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCEEEEEECCEEEEECCCCEEE
EHPRSFGRGETTYDPWHYVPVLARKPGALRNGAPFKDWVLPAAMERVRRKLAGVADGNRQ
CCCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHH
MVDILNAVLTDGLAAVEAACVEAIAHGVHSADVILNILARRRDPAPPANILTPAALALRY
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
APIADCARYDNLRRMV
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023192 [H]