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The map label for this gene is omp31 [H]

Identifier: 192289353

GI number: 192289353

Start: 985307

End: 986038

Strand: Reverse

Name: omp31 [H]

Synonym: Rpal_0925

Alternate gene names: 192289353

Gene position: 986038-985307 (Counterclockwise)

Preceding gene: 192289361

Following gene: 192289352

Centisome position: 17.17

GC content: 65.16

Gene sequence:

>732_bases
ATGAAGAAGATTCTGCTCGGCACCGTGGCCCTGGTCGCCCTCGGCGCGGCCCCGGCCCTCGCCGCGGACCTCGCTGCCCG
CCCGTACACCAAGGCTCCCGCCTACGCCCCGGCCCCGGTTTACAACTGGACCGGCTTCTACATCGGTGGTCACATCGGTG
GCGCCTTCTCGGGCGACAACAGCATCGGCACCGGCGTTACCGCCAGCGACAACGGCAAGTTCCTCGGCGGTGTGCAGGCC
GGTTACGACTGGCAGTTCGCTCCGAACTGGGTGCTCGGTGTTGAAGGCCAGTACTCCTGGCTGAGCGGCACCAACCAGTC
GGTCGCCTTCGGAGGCACCCTCAACGGCGCCCCCGGTGTCTTCACCTATGCCGACAACCAGCGTGGTCTGGCGTCGGTCA
CCGGCCGCCTCGGCTACACCTGGGGTCCGGCACTGCTCTACGTCAAGGGCGGTTGGGCTTACGCCGACTACTCGAGCAGC
TTGACCTTCGTCCCCAACGCCGGCGGGTTCGCTGCCGTTGCGATCGACAGCAAGAAGGACGGTTACACCGTCGGTGGCGG
TCTCGAATACCTGTTCGCTCCGAACTGGTCGGGCAAGATCGAGTACCAGTACTACGACTTCGGCAACGTCGACCTCGGCA
ATGGCTTCTCGGCCAAGAACGACGAGCACGTTGTCAAGGCCGGCCTGAACTACCGCTTCAACTGGGGCGGTCCGGTCGTC
GCCAAGTACTAA

Upstream 100 bases:

>100_bases
TGTGGCCTCCCGGTGACAGCATTTTACGCAAAATCCCGCTAAGCCATTCAGCAGATGGCGCCGAATAGCGGTGCGTCTGA
CAAAGTCTGGAGACAACGAC

Downstream 100 bases:

>100_bases
GACCTGATCACTTCCTTCTTCGGAAGTTGGAAGGGCCGGCCTCGCGCCGGCCCTTTTTCATTTTCGAAACCATGTCGGGA
CCGGGCGTACCGATCACTCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKKILLGTVALVALGAAPALAADLAARPYTKAPAYAPAPVYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGKFLGGVQA
GYDWQFAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYSSS
LTFVPNAGGFAAVAIDSKKDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVDLGNGFSAKNDEHVVKAGLNYRFNWGGPVV
AKY

Sequences:

>Translated_243_residues
MKKILLGTVALVALGAAPALAADLAARPYTKAPAYAPAPVYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGKFLGGVQA
GYDWQFAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYSSS
LTFVPNAGGFAAVAIDSKKDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVDLGNGFSAKNDEHVVKAGLNYRFNWGGPVV
AKY
>Mature_243_residues
MKKILLGTVALVALGAAPALAADLAARPYTKAPAYAPAPVYNWTGFYIGGHIGGAFSGDNSIGTGVTASDNGKFLGGVQA
GYDWQFAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGVFTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYSSS
LTFVPNAGGFAAVAIDSKKDGYTVGGGLEYLFAPNWSGKIEYQYYDFGNVDLGNGFSAKNDEHVVKAGLNYRFNWGGPVV
AKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 25483; Mature: 25483

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLGTVALVALGAAPALAADLAARPYTKAPAYAPAPVYNWTGFYIGGHIGGAFSGDN
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCC
SIGTGVTASDNGKFLGGVQAGYDWQFAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGV
CCCCCEEECCCCCEEECCCCCCCCEECCCEEEECCCCEEEECCCCCEEEECCCCCCCCCE
FTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYSSSLTFVPNAGGFAAVAIDSKKD
EEEECCCCCCEEHHCCCCEEECCEEEEEECCEEEEECCCCEEEEECCCCEEEEEEECCCC
GYTVGGGLEYLFAPNWSGKIEYQYYDFGNVDLGNGFSAKNDEHVVKAGLNYRFNWGGPVV
CEEECCCEEEEEECCCCCEEEEEEEECCCEECCCCCCCCCCCEEEEECCCEEEECCCCEE
AKY
EEC
>Mature Secondary Structure
MKKILLGTVALVALGAAPALAADLAARPYTKAPAYAPAPVYNWTGFYIGGHIGGAFSGDN
CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCC
SIGTGVTASDNGKFLGGVQAGYDWQFAPNWVLGVEGQYSWLSGTNQSVAFGGTLNGAPGV
CCCCCEEECCCCCEEECCCCCCCCEECCCEEEECCCCEEEECCCCCEEEECCCCCCCCCE
FTYADNQRGLASVTGRLGYTWGPALLYVKGGWAYADYSSSLTFVPNAGGFAAVAIDSKKD
EEEECCCCCCEEHHCCCCEEECCEEEEEECCEEEEECCCCEEEEECCCCEEEEEEECCCC
GYTVGGGLEYLFAPNWSGKIEYQYYDFGNVDLGNGFSAKNDEHVVKAGLNYRFNWGGPVV
CEEECCCEEEEEECCCCCEEEEEEEECCCEECCCCCCCCCCCEEEEECCCEEEECCCCEE
AKY
EEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]