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The map label for this gene is mcp4 [H]

Identifier: 192289352

GI number: 192289352

Start: 982953

End: 985091

Strand: Reverse

Name: mcp4 [H]

Synonym: Rpal_0924

Alternate gene names: 192289352

Gene position: 985091-982953 (Counterclockwise)

Preceding gene: 192289353

Following gene: 192289351

Centisome position: 17.15

GC content: 65.59

Gene sequence:

>2139_bases
ATGTCTGGGAAATTCGCGAAATTCCGACGTCTGCGGCTGAAATTTCCGCAACTCGGAATTCGTGGCAGCCTGTTCGCTGC
GTTCACGGTGATCGCCGGCATGGCAATCCTGATCAGCGCGTGGGCCGGAATCAGCCTGCATCAGCTTGGGCGCACGATCG
CCGAACTGAGCGGCCGCGACATTCCCAAACTCGCTGCCAGCCTCCAGCTCGCCACCGAAAGCGAAAGTCTCGCCAGCCAG
GCACCGATCCTTCTCGACTCGCTCTCCGCCGAACAACTCCGTGAGCGCTCAGCCCGGATGAAGGCGGCGCAGCAGGTCGC
GATCCAGAAACTCGCCGACATCACCACCTATGGCGGCGACAAGGCAGTCGTTTCGGCGCTGAGCGAAACCCTGAAGAATA
TCGACGACACCATCCGCAGCCTCGGCGCAGCCGCCAAGGAGCGGCTCGATCTGACCACGCAGCACGCCAAACTGTACGAA
GAGTTGCGCCGCTCGCACGACGCCTTCATTGCAGTTGCCAACCCGGCGATGCTTGATGCGCAGACTCAGATGAATGCCGT
GCTCGGTTCGGCCAATCTGTCGCAGGACGACGCCACAGCGACCGGACGCCAGATCGAACAGCTCGGCAACGTCATCGCCC
AGAGCAATCTGATCGCCTCGAACCTGATGGCGGCTCTTTCGGCCTCCAGCGCCGATGACCTGGAGCCGGTTGAAGCCAGC
TTCAAGGAAGCCCGTCAGGTGGTGAACACCAATCTCGACGGCCTCCCGCAGAACCAGACCACCGCCAACATCAAGACCGC
AGCGCAGAAGCTGATGGCGCTCGGCGACGGCAAGACCGGCGCATTCAAGCTGCGCCAGCTCGAACTCGATGCCCGCGACT
ATCGCGATCTGCTGCTCGACGAGACCCGCAAGCTCAACGTCGGCCTCGGCATCAGCGTCAAGCAGCTCGTCGACAACGTC
CGCAACGAGACGACGGTCGGCACCTCGGACGCGCAGGCGCAAATCACGCTGGCCACGCGGGTGATGATCGGGCTCGGCGC
GGCGACCCTGATCGGCTCGGCGCTGTTCGTCTGGCTGTATGTCGGCCGCAGCATCCTGCGCCGGATTGGCGGCCTGCAGA
AGTCGATGCAGAGCCTGTCGGCCGGCGACCTCAGCACCGCCATCGAGCGCGGCAGCCGCCGCGACGAAATCGCCGTGATG
GCCGAGTCGCTGGAAGTGTTCCGCGACAACATGATCCGGGCCCGGACGTTGAGCGAGGAGCAGGACAAGGATCGGGCCGC
CAAGGCCGAGCGGACCCAGCGGATCGAGGCTCGGATCGCCGAATTCGAGGCGACCGTGCGCAGTGCAATGGAGAAGCTGC
AATCCTCCGCCGACCAGATGCAGGAAACCGCGCACACAATGGCGACCACCTCCGAACAGTCGAGCGCGCTGGTCACCACC
GTCGCGTCGGCTGCGGAAGAAACCTCGGTCAACGTTCAGACCGTGGCAACCGGCACCGAGCAACTCGCCTCGTCGATCGC
CGAGATCAGCCGTCAGGTCACCACCTCGGCGGAGATCGCGACCCGCGCCGTGCGCGAAGCGGGCGAGACCGACACCACCA
TGCAGGGCCTCGCCGATAACGCCGAGCGGATCAGCGCGGTGATCGACCTGATCCAGAGCATCGCATCCCAGACCAACCTG
CTGGCGCTCAATGCCACGATCGAGGCGGCGCGTGCCGGTGACGCCGGCCGCGGCTTCGCGGTGGTGGCCGCCGAGGTCAA
GGATCTCGCCAGCCAGACCGCCAAGGCGACCGAGGAGATCCGGGCGCAGATCGCCGCGATGCAGGGGGTGACCAGTTCGG
CCGTTGGCGCGATCCGCAATATCGGCCAGACCATTACTTCGATCAACGAGGTGACCACCGCCATCACCGCCGCCGTCGAA
GAACAGGGCGCGGCGACCCGCGAGATCGCCCGCAACATCCAGCATGCAGCCGGCGGCACCAGCGAAGTCTCCAGTAACAT
CGTCGGCGTCAGCGCCGCCGCCTCACAGGCCGGCTCCGCTGCAGCCGAGGTGCTGAACGCCTCCGGCTCGCTGCGCCAGG
AAGCGGCGCTGCTGCGCGAGGAGATCGACGCGTTCCTGACCAATATCCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
TCGTAAAACGACGTGAAGAATATTAACCCCCTAAACTGATACTCCCGGCCGGCGTCGCCGAGACGACGCGTCATTGCAAA
GTCCAGGTTGGGGGGGAATC

Downstream 100 bases:

>100_bases
TCGGCAAACGATATGAAGGAAAGGGCCGGTGGCGCGCGCCACCGGCCCTTTTTGCGTCCAGATGCTGGAATTTGAGACCT
GTGAGGACTGCAGCCGCCCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 711

Protein sequence:

>712_residues
MSGKFAKFRRLRLKFPQLGIRGSLFAAFTVIAGMAILISAWAGISLHQLGRTIAELSGRDIPKLAASLQLATESESLASQ
APILLDSLSAEQLRERSARMKAAQQVAIQKLADITTYGGDKAVVSALSETLKNIDDTIRSLGAAAKERLDLTTQHAKLYE
ELRRSHDAFIAVANPAMLDAQTQMNAVLGSANLSQDDATATGRQIEQLGNVIAQSNLIASNLMAALSASSADDLEPVEAS
FKEARQVVNTNLDGLPQNQTTANIKTAAQKLMALGDGKTGAFKLRQLELDARDYRDLLLDETRKLNVGLGISVKQLVDNV
RNETTVGTSDAQAQITLATRVMIGLGAATLIGSALFVWLYVGRSILRRIGGLQKSMQSLSAGDLSTAIERGSRRDEIAVM
AESLEVFRDNMIRARTLSEEQDKDRAAKAERTQRIEARIAEFEATVRSAMEKLQSSADQMQETAHTMATTSEQSSALVTT
VASAAEETSVNVQTVATGTEQLASSIAEISRQVTTSAEIATRAVREAGETDTTMQGLADNAERISAVIDLIQSIASQTNL
LALNATIEAARAGDAGRGFAVVAAEVKDLASQTAKATEEIRAQIAAMQGVTSSAVGAIRNIGQTITSINEVTTAITAAVE
EQGAATREIARNIQHAAGGTSEVSSNIVGVSAAASQAGSAAAEVLNASGSLRQEAALLREEIDAFLTNIRAA

Sequences:

>Translated_712_residues
MSGKFAKFRRLRLKFPQLGIRGSLFAAFTVIAGMAILISAWAGISLHQLGRTIAELSGRDIPKLAASLQLATESESLASQ
APILLDSLSAEQLRERSARMKAAQQVAIQKLADITTYGGDKAVVSALSETLKNIDDTIRSLGAAAKERLDLTTQHAKLYE
ELRRSHDAFIAVANPAMLDAQTQMNAVLGSANLSQDDATATGRQIEQLGNVIAQSNLIASNLMAALSASSADDLEPVEAS
FKEARQVVNTNLDGLPQNQTTANIKTAAQKLMALGDGKTGAFKLRQLELDARDYRDLLLDETRKLNVGLGISVKQLVDNV
RNETTVGTSDAQAQITLATRVMIGLGAATLIGSALFVWLYVGRSILRRIGGLQKSMQSLSAGDLSTAIERGSRRDEIAVM
AESLEVFRDNMIRARTLSEEQDKDRAAKAERTQRIEARIAEFEATVRSAMEKLQSSADQMQETAHTMATTSEQSSALVTT
VASAAEETSVNVQTVATGTEQLASSIAEISRQVTTSAEIATRAVREAGETDTTMQGLADNAERISAVIDLIQSIASQTNL
LALNATIEAARAGDAGRGFAVVAAEVKDLASQTAKATEEIRAQIAAMQGVTSSAVGAIRNIGQTITSINEVTTAITAAVE
EQGAATREIARNIQHAAGGTSEVSSNIVGVSAAASQAGSAAAEVLNASGSLRQEAALLREEIDAFLTNIRAA
>Mature_711_residues
SGKFAKFRRLRLKFPQLGIRGSLFAAFTVIAGMAILISAWAGISLHQLGRTIAELSGRDIPKLAASLQLATESESLASQA
PILLDSLSAEQLRERSARMKAAQQVAIQKLADITTYGGDKAVVSALSETLKNIDDTIRSLGAAAKERLDLTTQHAKLYEE
LRRSHDAFIAVANPAMLDAQTQMNAVLGSANLSQDDATATGRQIEQLGNVIAQSNLIASNLMAALSASSADDLEPVEASF
KEARQVVNTNLDGLPQNQTTANIKTAAQKLMALGDGKTGAFKLRQLELDARDYRDLLLDETRKLNVGLGISVKQLVDNVR
NETTVGTSDAQAQITLATRVMIGLGAATLIGSALFVWLYVGRSILRRIGGLQKSMQSLSAGDLSTAIERGSRRDEIAVMA
ESLEVFRDNMIRARTLSEEQDKDRAAKAERTQRIEARIAEFEATVRSAMEKLQSSADQMQETAHTMATTSEQSSALVTTV
ASAAEETSVNVQTVATGTEQLASSIAEISRQVTTSAEIATRAVREAGETDTTMQGLADNAERISAVIDLIQSIASQTNLL
ALNATIEAARAGDAGRGFAVVAAEVKDLASQTAKATEEIRAQIAAMQGVTSSAVGAIRNIGQTITSINEVTTAITAAVEE
QGAATREIARNIQHAAGGTSEVSSNIVGVSAAASQAGSAAAEVLNASGSLRQEAALLREEIDAFLTNIRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=340, Percent_Identity=27.0588235294118, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1788195, Length=235, Percent_Identity=33.6170212765957, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1787690, Length=232, Percent_Identity=33.1896551724138, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1788194, Length=187, Percent_Identity=34.2245989304813, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1789453, Length=242, Percent_Identity=31.404958677686, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 75247; Mature: 75116

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKFAKFRRLRLKFPQLGIRGSLFAAFTVIAGMAILISAWAGISLHQLGRTIAELSGRD
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
IPKLAASLQLATESESLASQAPILLDSLSAEQLRERSARMKAAQQVAIQKLADITTYGGD
HHHHHHHHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KAVVSALSETLKNIDDTIRSLGAAAKERLDLTTQHAKLYEELRRSHDAFIAVANPAMLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
QTQMNAVLGSANLSQDDATATGRQIEQLGNVIAQSNLIASNLMAALSASSADDLEPVEAS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FKEARQVVNTNLDGLPQNQTTANIKTAAQKLMALGDGKTGAFKLRQLELDARDYRDLLLD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHEECCCHHHHHHHHHH
ETRKLNVGLGISVKQLVDNVRNETTVGTSDAQAQITLATRVMIGLGAATLIGSALFVWLY
CCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRSILRRIGGLQKSMQSLSAGDLSTAIERGSRRDEIAVMAESLEVFRDNMIRARTLSEE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
QDKDRAAKAERTQRIEARIAEFEATVRSAMEKLQSSADQMQETAHTMATTSEQSSALVTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VASAAEETSVNVQTVATGTEQLASSIAEISRQVTTSAEIATRAVREAGETDTTMQGLADN
HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AERISAVIDLIQSIASQTNLLALNATIEAARAGDAGRGFAVVAAEVKDLASQTAKATEEI
HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAQIAAMQGVTSSAVGAIRNIGQTITSINEVTTAITAAVEEQGAATREIARNIQHAAGGT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
SEVSSNIVGVSAAASQAGSAAAEVLNASGSLRQEAALLREEIDAFLTNIRAA
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGKFAKFRRLRLKFPQLGIRGSLFAAFTVIAGMAILISAWAGISLHQLGRTIAELSGRD
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
IPKLAASLQLATESESLASQAPILLDSLSAEQLRERSARMKAAQQVAIQKLADITTYGGD
HHHHHHHHHHHCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KAVVSALSETLKNIDDTIRSLGAAAKERLDLTTQHAKLYEELRRSHDAFIAVANPAMLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
QTQMNAVLGSANLSQDDATATGRQIEQLGNVIAQSNLIASNLMAALSASSADDLEPVEAS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
FKEARQVVNTNLDGLPQNQTTANIKTAAQKLMALGDGKTGAFKLRQLELDARDYRDLLLD
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHEECCCHHHHHHHHHH
ETRKLNVGLGISVKQLVDNVRNETTVGTSDAQAQITLATRVMIGLGAATLIGSALFVWLY
CCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRSILRRIGGLQKSMQSLSAGDLSTAIERGSRRDEIAVMAESLEVFRDNMIRARTLSEE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
QDKDRAAKAERTQRIEARIAEFEATVRSAMEKLQSSADQMQETAHTMATTSEQSSALVTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VASAAEETSVNVQTVATGTEQLASSIAEISRQVTTSAEIATRAVREAGETDTTMQGLADN
HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
AERISAVIDLIQSIASQTNLLALNATIEAARAGDAGRGFAVVAAEVKDLASQTAKATEEI
HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAQIAAMQGVTSSAVGAIRNIGQTITSINEVTTAITAAVEEQGAATREIARNIQHAAGGT
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
SEVSSNIVGVSAAASQAGSAAAEVLNASGSLRQEAALLREEIDAFLTNIRAA
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]