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The map label for this gene is omp31 [H]

Identifier: 192289301

GI number: 192289301

Start: 926137

End: 927486

Strand: Reverse

Name: omp31 [H]

Synonym: Rpal_0873

Alternate gene names: 192289301

Gene position: 927486-926137 (Counterclockwise)

Preceding gene: 192289305

Following gene: 192289299

Centisome position: 16.15

GC content: 65.11

Gene sequence:

>1350_bases
ATGAAACGCATTTTCGCCGGCGTCGTGCTGGCTGGCACTGCCGCCGTCAGCGCCCAAGCGGCCGATCTCGCCGTCAAGGC
TCCGTACCTGAAGGCCCCGGTTGCCGCCGTCTATGACTGGACGGGCTTCTACATCGGCGCCAACGTCGGCGTCGGACTCG
GCCGCAACCTTCAGACGCACGCCTATCCGGGCGGCGCCTCACTGAACACCACCTACCTGCAGCCGCAGGGCGTGATCGGT
GGCGGCCAGATCGGCTACAACTGGCAGCTCGGCTCGTTCCTCGGCCCGATGCTGCTCGGCCTTGAAGCCGACATCCAGGG
CAGCGGTGCCAGCGACGGCTATACCTCGCTCAACGGCCTCGCCACCAACTACAACCAGAAGCTCGACTGGTTCGGCACCG
TGCGCGGCCGCGTCGGCCTCGTGCGCGGCCCGGCGGTCGCCTACTTCACCGGTGGTTATGCGGTCGGCAGCGTCAAGACC
ACCGTTACCGAAGGCGGTCTGGTGGCGTTCGACAACAGCAAGACCCGCTCCGGCTGGGTGATCGGCTCGGGTGTGGAAGC
TGCGCTGGGCGGCAACTGGACCGGCAAGATCGAATATCTGTATCTCGACCTCGGCAACCAGACCGACTTCTTCGGCAATC
AGAGCCTGCGCACCGAAGTGCGCGAGAGCATCTTCCGCGCCGGTCTGAACTACCGCATCGGCGGCAACGGCACCTACATC
ACCCCGCCGCCGGCGAACTGGGCTGGCCTGTACATCGGCGGCAATTTCGGCGGTGCGACCGGACGTGATCGCTCGAGCCT
GACCCTCGGCGGCGGCCAGACCGACACCTTCAACCTGGCGCCGGATGGCTTCATCGGCGGCGGCCAGATCGGCTACAACT
GGCAGGCCTCGAACTGGGTGTTCGGTGTCGAAGCCGACTTCCAGGGCTCGACCCAGAAGGATCAGCGCGCCTCGGTGCTC
GGCCCGCGGGCCTACTATGACGCCAAGCTGCCCTGGTTCGGCACTGCGCGTGGCCGCATCGGCTACTCGCTCGGTTCGAC
CCTGTTCTACGGCACCGCCGGCTACGCCTACGGCAACATCAAGTCCGATATCGTCAGCTCGATCGGCAACTACAGCTTCA
AGACCACCAAGGGTGGTTGGGCTGCCGGCGCCGGCATCGAGACTCCGTTCCAGCTGTTCGGCCTGCTTGGCCCGAACTGG
ACCTCGAAGACCGAATATCTCTACGTTGACCTCGGCTCGACCACCGACGTGTTCGGCGGCACCGGCATCAACACCACCAA
GGTCACCGAACACATCCTGCGTACCGGCATCAACTATCACTTCAATCAGCCGGTGGTCGCGAAGTACTAA

Upstream 100 bases:

>100_bases
TTGTTTACCCGCGATTTCCGGCGGGTGTGGCCGCCCGGGTACAGACGACTCGGCGCCGCCCCCGTAATGTTCGCGCAGGT
TTAAGAGGGGATTCCCGTCC

Downstream 100 bases:

>100_bases
TCTTTGCCTCACAGCAACGGACACAGAGCCCCGGCCTAGCGGCCGGGGTTTTGTTTGCGGCATCCTCGTCATTGCGCACG
AAACGAAGCGATCCAGGGCT

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAVYDWTGFYIGANVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIG
GGQIGYNWQLGSFLGPMLLGLEADIQGSGASDGYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKT
TVTEGGLVAFDNSKTRSGWVIGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGNQSLRTEVRESIFRAGLNYRIGGNGTYI
TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWVFGVEADFQGSTQKDQRASVL
GPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGYAYGNIKSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNW
TSKTEYLYVDLGSTTDVFGGTGINTTKVTEHILRTGINYHFNQPVVAKY

Sequences:

>Translated_449_residues
MKRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAVYDWTGFYIGANVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIG
GGQIGYNWQLGSFLGPMLLGLEADIQGSGASDGYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKT
TVTEGGLVAFDNSKTRSGWVIGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGNQSLRTEVRESIFRAGLNYRIGGNGTYI
TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWVFGVEADFQGSTQKDQRASVL
GPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGYAYGNIKSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNW
TSKTEYLYVDLGSTTDVFGGTGINTTKVTEHILRTGINYHFNQPVVAKY
>Mature_449_residues
MKRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAVYDWTGFYIGANVGVGLGRNLQTHAYPGGASLNTTYLQPQGVIG
GGQIGYNWQLGSFLGPMLLGLEADIQGSGASDGYTSLNGLATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKT
TVTEGGLVAFDNSKTRSGWVIGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGNQSLRTEVRESIFRAGLNYRIGGNGTYI
TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWVFGVEADFQGSTQKDQRASVL
GPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGYAYGNIKSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNW
TSKTEYLYVDLGSTTDVFGGTGINTTKVTEHILRTGINYHFNQPVVAKY

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 47385; Mature: 47385

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAVYDWTGFYIGANVGVGLGRNLQTH
CCCCEEEEEEECCHHHCCCCCCEEEECCCHHCCCEEEEECCCEEEECCCCCCCCCCCEEE
AYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLGPMLLGLEADIQGSGASDGYTSLNGL
ECCCCCCCEEEEECCCCCEECCEEEEEEEHHHHHHHHHCCEECCCCCCCCCCCCCCCCCE
ATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKTTVTEGGLVAFDNSKTRSGWV
ECCCCCCEEEEEEECCCEEEEECCEEEEEECCEEECEEEEEEECCCEEEECCCCCCCCEE
IGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGNQSLRTEVRESIFRAGLNYRIGGNGTYI
EECCCEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCEE
TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWV
CCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCEE
FGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGYAYGNI
EEEECCCCCCCCCCCHHHHCCCCCEECCCCCEEECCCCCEEECCCCEEEECCCCEEECCH
KSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTDVFGG
HHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
TGINTTKVTEHILRTGINYHFNQPVVAKY
CCCCHHHHHHHHHHCCCCEECCCCEEECC
>Mature Secondary Structure
MKRIFAGVVLAGTAAVSAQAADLAVKAPYLKAPVAAVYDWTGFYIGANVGVGLGRNLQTH
CCCCEEEEEEECCHHHCCCCCCEEEECCCHHCCCEEEEECCCEEEECCCCCCCCCCCEEE
AYPGGASLNTTYLQPQGVIGGGQIGYNWQLGSFLGPMLLGLEADIQGSGASDGYTSLNGL
ECCCCCCCEEEEECCCCCEECCEEEEEEEHHHHHHHHHCCEECCCCCCCCCCCCCCCCCE
ATNYNQKLDWFGTVRGRVGLVRGPAVAYFTGGYAVGSVKTTVTEGGLVAFDNSKTRSGWV
ECCCCCCEEEEEEECCCEEEEECCEEEEEECCEEECEEEEEEECCCEEEECCCCCCCCEE
IGSGVEAALGGNWTGKIEYLYLDLGNQTDFFGNQSLRTEVRESIFRAGLNYRIGGNGTYI
EECCCEEECCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCEE
TPPPANWAGLYIGGNFGGATGRDRSSLTLGGGQTDTFNLAPDGFIGGGQIGYNWQASNWV
CCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCEE
FGVEADFQGSTQKDQRASVLGPRAYYDAKLPWFGTARGRIGYSLGSTLFYGTAGYAYGNI
EEEECCCCCCCCCCCHHHHCCCCCEECCCCCEEECCCCCEEECCCCEEEECCCCEEECCH
KSDIVSSIGNYSFKTTKGGWAAGAGIETPFQLFGLLGPNWTSKTEYLYVDLGSTTDVFGG
HHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC
TGINTTKVTEHILRTGINYHFNQPVVAKY
CCCCHHHHHHHHHHCCCCEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]