| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is phnN [C]
Identifier: 192289184
GI number: 192289184
Start: 797880
End: 798464
Strand: Reverse
Name: phnN [C]
Synonym: Rpal_0755
Alternate gene names: 192289184
Gene position: 798464-797880 (Counterclockwise)
Preceding gene: 192289185
Following gene: 192289183
Centisome position: 13.9
GC content: 69.74
Gene sequence:
>585_bases ATGACCGATATCGCGGTGGCGGAGCAGACAACGAAACTGATCGGCCCGGGTCGGCTGGTGCTGGTGGTCGGCCCATCCGG CGCCGGCAAGGACACGCTGATCAATGCCGCCCGCACGCTCTGTGCCGACGATCCGGCGATCGTTTTTGCGCGCCGCGTCG TCACCCGCGAAGCCTCCGCGGCCGAGGACAATCTGCAGGTCACGCCGGACGACTTCAGCCGCCTCGAAGCGGCCGGCGAC TTCGCACTGCATTGGCGCGCCCACGGCCACGCCTACGGTCTGCCGCGCGGTCTCGACGACGATATCCGCGCCGGACGCAC CGTGGTGGCCAACGTGTCGCGGATGGTAATCGACCCAGCACGCAGCGCTTACGCCAATGTCGTCGTCGTGCTGATCACGG CGCCGGCCGAGGTGCTGGCCGCCCGGATCGCGGCGCGCGCGCGCGCCAGCGACGGCAGCATCACCGACCGCGTCGGGCGC AGCGTTGCGGCGCATCCCGACGTCACCATCAGCAATGTCGGCGACCCGATCGCCCACGCCCGAGACTTGTTGGAGATCAT CCGCCATGGACGCCCGCAGCCCTGA
Upstream 100 bases:
>100_bases GCGAGATCTCCAAGGGCAAACGTGCCGACCTGATCCGTGTCCACGTCGCGCATGACGTGCCGGCGGTGCGCAGCGTCTGG CGCGAAGGACAGCGCGTGGC
Downstream 100 bases:
>100_bases CGATCGCCGCACCGCCTTCCCTGCGCTCGACACGGTCGAGGCGCTGGAGGCGATCTACGGCGTACCCAACGACGCCTCCA CCGAAAAAGTGGCACACTGG
Product: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
Products: NA
Alternate protein names: TdRPase 2 [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTDIAVAEQTTKLIGPGRLVLVVGPSGAGKDTLINAARTLCADDPAIVFARRVVTREASAAEDNLQVTPDDFSRLEAAGD FALHWRAHGHAYGLPRGLDDDIRAGRTVVANVSRMVIDPARSAYANVVVVLITAPAEVLAARIAARARASDGSITDRVGR SVAAHPDVTISNVGDPIAHARDLLEIIRHGRPQP
Sequences:
>Translated_194_residues MTDIAVAEQTTKLIGPGRLVLVVGPSGAGKDTLINAARTLCADDPAIVFARRVVTREASAAEDNLQVTPDDFSRLEAAGD FALHWRAHGHAYGLPRGLDDDIRAGRTVVANVSRMVIDPARSAYANVVVVLITAPAEVLAARIAARARASDGSITDRVGR SVAAHPDVTISNVGDPIAHARDLLEIIRHGRPQP >Mature_193_residues TDIAVAEQTTKLIGPGRLVLVVGPSGAGKDTLINAARTLCADDPAIVFARRVVTREASAAEDNLQVTPDDFSRLEAAGDF ALHWRAHGHAYGLPRGLDDDIRAGRTVVANVSRMVIDPARSAYANVVVVLITAPAEVLAARIAARARASDGSITDRVGRS VAAHPDVTISNVGDPIAHARDLLEIIRHGRPQP
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790532, Length=175, Percent_Identity=30.2857142857143, Blast_Score=77, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR012699 - InterPro: IPR013102 - InterPro: IPR000053 - InterPro: IPR017872 - InterPro: IPR013466 [H]
Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]
EC number: =2.4.2.4 [H]
Molecular weight: Translated: 20472; Mature: 20341
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIAVAEQTTKLIGPGRLVLVVGPSGAGKDTLINAARTLCADDPAIVFARRVVTREASA CCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC AEDNLQVTPDDFSRLEAAGDFALHWRAHGHAYGLPRGLDDDIRAGRTVVANVSRMVIDPA CCCCCEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCH RSAYANVVVVLITAPAEVLAARIAARARASDGSITDRVGRSVAAHPDVTISNVGDPIAHA HHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCCHHHHH RDLLEIIRHGRPQP HHHHHHHHCCCCCC >Mature Secondary Structure TDIAVAEQTTKLIGPGRLVLVVGPSGAGKDTLINAARTLCADDPAIVFARRVVTREASA CCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC AEDNLQVTPDDFSRLEAAGDFALHWRAHGHAYGLPRGLDDDIRAGRTVVANVSRMVIDPA CCCCCEECCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCH RSAYANVVVVLITAPAEVLAARIAARARASDGSITDRVGRSVAAHPDVTISNVGDPIAHA HHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCCCHHHHH RDLLEIIRHGRPQP HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA