Click here to switch to the map view.

The map label for this gene is phnM [H]

Identifier: 192289185

GI number: 192289185

Start: 798461

End: 799639

Strand: Reverse

Name: phnM [H]

Synonym: Rpal_0756

Alternate gene names: 192289185

Gene position: 799639-798461 (Counterclockwise)

Preceding gene: 192289186

Following gene: 192289184

Centisome position: 13.92

GC content: 67.18

Gene sequence:

>1179_bases
ATGACCAATGGAATCAACGAGACCATGAACAATTCGCAGGAGATGGTGCTGGGCAATGCCCGGCTGGTGCTGGCCGACCG
AGTGATCGAGCACGGCTGGGTCGCGATCGCTGACGGTGTGATCGCGGAAGTCGGCGAAGGCGACGCACCGAACGGCGCCA
AGGACATGCACGGCGACCTGGTGATGCCGGGGCTGGTCGAGCTGCACACCGATCATCTCGAAGCGCACTACACGCCGCGG
CCGAAGGTGCAGTGGAATCCGGTCGCCGCCGTGGTGTCCTACGACGGCCAGCTCGCCACCTGCGGCATCACCACGGTGCT
CGACTCGTTGCGGGTGTGGCGCGAGGAAGGCGCCGAGGAGGTCGACGGCCAGGCGATCGTGCTGGCCGGCGCAATCTCGA
CGGCGCGCGACGCGCAGCTGCTGCGCGCCGATCACTTCCTGCATCTGCGCTGCGAAATCCCGATGCCGAACGTGGTGGCC
GAGGCCAAGGAGCTGATCGACCGCCCCGACATCCGACTGATGTCGCTGATGGATCACACGCCGGGCCAGCGCCAGTTCCG
CGACGAGGAAAAGCTGCGCGACTACTACCGCGGCAAGGGCGCCGGCATGACCGACGCCGAGCTCGACGTGATGTTCGCAC
GCCGGGTGTACTGCAAGGAGAATTACGCCGACGCCAACATGCGGGCGATCGTCGAGCTGGCGCATCGCTACGAGATTCCG
CTGGCAAGCCACGACGACACCACGCCGGAGAACGTCGCCGACGCGATCCGCGACCGGGTTGCGGTCGCAGAATTCCCGAC
CACGCTGGAAGCGGCACGTGAACTGCACCAGGCCGGCATCGACATCCTGATGGGCGCGCCCAACGTGGTGCGCGGCGGCT
CCCATTCCGGCAATATCGCGGCGATCGATCTGGCGCACGAGGGACTGCTCGACATCCTGTCGTCGGACTACATCCCGTCG
AGCCTGCTGATCGCGGCGCTGCAATTGCCGATGCGGGCACCGGGGATCGACCTCGCCGCCGCGATCCGCACCGTCACCAA
GGCGCCGGCCGAGGCGGTCGGCCTCAACGATCGCGGCGAGATCTCCAAGGGCAAACGTGCCGACCTGATCCGTGTCCACG
TCGCGCATGACGTGCCGGCGGTGCGCAGCGTCTGGCGCGAAGGACAGCGCGTGGCATGA

Upstream 100 bases:

>100_bases
AGGCGCAGGGCGCCGCGATCATCGCCATCGTGCACGACGACGAGATCCGTGAGATCATCGCGGACCGCATCGTCGACGTG
ACCTCGTTTGCCGCCGCCGC

Downstream 100 bases:

>100_bases
CCGATATCGCGGTGGCGGAGCAGACAACGAAACTGATCGGCCCGGGTCGGCTGGTGCTGGTGGTCGGCCCATCCGGCGCC
GGCAAGGACACGCTGATCAA

Product: phosphonate metabolism protein PhnM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTNGINETMNNSQEMVLGNARLVLADRVIEHGWVAIADGVIAEVGEGDAPNGAKDMHGDLVMPGLVELHTDHLEAHYTPR
PKVQWNPVAAVVSYDGQLATCGITTVLDSLRVWREEGAEEVDGQAIVLAGAISTARDAQLLRADHFLHLRCEIPMPNVVA
EAKELIDRPDIRLMSLMDHTPGQRQFRDEEKLRDYYRGKGAGMTDAELDVMFARRVYCKENYADANMRAIVELAHRYEIP
LASHDDTTPENVADAIRDRVAVAEFPTTLEAARELHQAGIDILMGAPNVVRGGSHSGNIAAIDLAHEGLLDILSSDYIPS
SLLIAALQLPMRAPGIDLAAAIRTVTKAPAEAVGLNDRGEISKGKRADLIRVHVAHDVPAVRSVWREGQRVA

Sequences:

>Translated_392_residues
MTNGINETMNNSQEMVLGNARLVLADRVIEHGWVAIADGVIAEVGEGDAPNGAKDMHGDLVMPGLVELHTDHLEAHYTPR
PKVQWNPVAAVVSYDGQLATCGITTVLDSLRVWREEGAEEVDGQAIVLAGAISTARDAQLLRADHFLHLRCEIPMPNVVA
EAKELIDRPDIRLMSLMDHTPGQRQFRDEEKLRDYYRGKGAGMTDAELDVMFARRVYCKENYADANMRAIVELAHRYEIP
LASHDDTTPENVADAIRDRVAVAEFPTTLEAARELHQAGIDILMGAPNVVRGGSHSGNIAAIDLAHEGLLDILSSDYIPS
SLLIAALQLPMRAPGIDLAAAIRTVTKAPAEAVGLNDRGEISKGKRADLIRVHVAHDVPAVRSVWREGQRVA
>Mature_391_residues
TNGINETMNNSQEMVLGNARLVLADRVIEHGWVAIADGVIAEVGEGDAPNGAKDMHGDLVMPGLVELHTDHLEAHYTPRP
KVQWNPVAAVVSYDGQLATCGITTVLDSLRVWREEGAEEVDGQAIVLAGAISTARDAQLLRADHFLHLRCEIPMPNVVAE
AKELIDRPDIRLMSLMDHTPGQRQFRDEEKLRDYYRGKGAGMTDAELDVMFARRVYCKENYADANMRAIVELAHRYEIPL
ASHDDTTPENVADAIRDRVAVAEFPTTLEAARELHQAGIDILMGAPNVVRGGSHSGNIAAIDLAHEGLLDILSSDYIPSS
LLIAALQLPMRAPGIDLAAAIRTVTKAPAEAVGLNDRGEISKGKRADLIRVHVAHDVPAVRSVWREGQRVA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=381, Percent_Identity=42.257217847769, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 42726; Mature: 42595

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGINETMNNSQEMVLGNARLVLADRVIEHGWVAIADGVIAEVGEGDAPNGAKDMHGDL
CCCCCCHHHCCCCEEEECCCEEEHHHHHHHCCCEEEECCHHHHCCCCCCCCCCCCCCCCC
VMPGLVELHTDHLEAHYTPRPKVQWNPVAAVVSYDGQLATCGITTVLDSLRVWREEGAEE
CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHH
VDGQAIVLAGAISTARDAQLLRADHFLHLRCEIPMPNVVAEAKELIDRPDIRLMSLMDHT
CCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCC
PGQRQFRDEEKLRDYYRGKGAGMTDAELDVMFARRVYCKENYADANMRAIVELAHRYEIP
CCHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
LASHDDTTPENVADAIRDRVAVAEFPTTLEAARELHQAGIDILMGAPNVVRGGSHSGNIA
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEE
AIDLAHEGLLDILSSDYIPSSLLIAALQLPMRAPGIDLAAAIRTVTKAPAEAVGLNDRGE
EEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCC
ISKGKRADLIRVHVAHDVPAVRSVWREGQRVA
CCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure 
TNGINETMNNSQEMVLGNARLVLADRVIEHGWVAIADGVIAEVGEGDAPNGAKDMHGDL
CCCCCHHHCCCCEEEECCCEEEHHHHHHHCCCEEEECCHHHHCCCCCCCCCCCCCCCCC
VMPGLVELHTDHLEAHYTPRPKVQWNPVAAVVSYDGQLATCGITTVLDSLRVWREEGAEE
CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCHHH
VDGQAIVLAGAISTARDAQLLRADHFLHLRCEIPMPNVVAEAKELIDRPDIRLMSLMDHT
CCCCEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHCC
PGQRQFRDEEKLRDYYRGKGAGMTDAELDVMFARRVYCKENYADANMRAIVELAHRYEIP
CCHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
LASHDDTTPENVADAIRDRVAVAEFPTTLEAARELHQAGIDILMGAPNVVRGGSHSGNIA
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEE
AIDLAHEGLLDILSSDYIPSSLLIAALQLPMRAPGIDLAAAIRTVTKAPAEAVGLNDRGE
EEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCC
ISKGKRADLIRVHVAHDVPAVRSVWREGQRVA
CCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]