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The map label for this gene is 192289177

Identifier: 192289177

GI number: 192289177

Start: 789230

End: 789793

Strand: Reverse

Name: 192289177

Synonym: Rpal_0747

Alternate gene names: NA

Gene position: 789793-789230 (Counterclockwise)

Preceding gene: 192289181

Following gene: 192289176

Centisome position: 13.75

GC content: 67.02

Gene sequence:

>564_bases
ATGCAATTATTCGCCGAGCGCGGCCTGACGCAGATCAGCGTAACCGATTTGGCCCAGGCGGCCGGTGTCGCGCGGGGCAC
AGTTTACAATAACCTCGGCGACCTCACTGGCCTGTTCGACCTGGTGGTTACCAATTTGGCCACCGAATTGAATCCGCGGC
TGACCGTGGCGCTGGCGGATTGCCACGAGCCGGTGCAGCGGCTCGCCACCTGGATGCGGCTATTGATCCGTCAGGCGCAC
GAAGAGCCGCGGCTCGGCCGGTTCGTCTGCCGGTTCGGCATGAGCTCCACGACACTCCGGGTGGTCTGGGACGGACGACC
GCTCGACGACCTCGCCACCGGGCTGGCGGAGCGCGGCCACAGCCTCAGTCCTGAGCAAATTGCCTCCGCTGCTAATTTCA
TCTCCGGCGCGGTCCTGGGTGCCATCTTTACGGGTCTCGACGGCCACCGCACGTGGGCGGACGCGGCCACCGAGACCGTG
GAATGGGTGCTGGTCGGCCTCGGGGTGTCGCGCGAGGAAGCACGGAACCTGGCGGCCGGCGATCTGCCGCCGCTGCCGGA
GTGA

Upstream 100 bases:

>100_bases
CGAAGCTCGTTCGCGGTATTGAACACAATTGTTCAAATCAGATCAAGTGTGTTCAAGGATTGTGTCCAGCCCGGCGCAGC
GACAGATCTATCTGGCGGCG

Downstream 100 bases:

>100_bases
TCACAGCGGCGAGACGGCACGGACCTCGCCGTTGAACTTACCGCCCCCCGGTCTTATGCCTGGGCGATGCAGACCTCTAT
TGATACTGCCCCGCCGCTGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQLFAERGLTQISVTDLAQAAGVARGTVYNNLGDLTGLFDLVVTNLATELNPRLTVALADCHEPVQRLATWMRLLIRQAH
EEPRLGRFVCRFGMSSTTLRVVWDGRPLDDLATGLAERGHSLSPEQIASAANFISGAVLGAIFTGLDGHRTWADAATETV
EWVLVGLGVSREEARNLAAGDLPPLPE

Sequences:

>Translated_187_residues
MQLFAERGLTQISVTDLAQAAGVARGTVYNNLGDLTGLFDLVVTNLATELNPRLTVALADCHEPVQRLATWMRLLIRQAH
EEPRLGRFVCRFGMSSTTLRVVWDGRPLDDLATGLAERGHSLSPEQIASAANFISGAVLGAIFTGLDGHRTWADAATETV
EWVLVGLGVSREEARNLAAGDLPPLPE
>Mature_187_residues
MQLFAERGLTQISVTDLAQAAGVARGTVYNNLGDLTGLFDLVVTNLATELNPRLTVALADCHEPVQRLATWMRLLIRQAH
EEPRLGRFVCRFGMSSTTLRVVWDGRPLDDLATGLAERGHSLSPEQIASAANFISGAVLGAIFTGLDGHRTWADAATETV
EWVLVGLGVSREEARNLAAGDLPPLPE

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20157; Mature: 20157

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFAERGLTQISVTDLAQAAGVARGTVYNNLGDLTGLFDLVVTNLATELNPRLTVALAD
CCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
CHEPVQRLATWMRLLIRQAHEEPRLGRFVCRFGMSSTTLRVVWDGRPLDDLATGLAERGH
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC
SLSPEQIASAANFISGAVLGAIFTGLDGHRTWADAATETVEWVLVGLGVSREEARNLAAG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
DLPPLPE
CCCCCCC
>Mature Secondary Structure
MQLFAERGLTQISVTDLAQAAGVARGTVYNNLGDLTGLFDLVVTNLATELNPRLTVALAD
CCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
CHEPVQRLATWMRLLIRQAHEEPRLGRFVCRFGMSSTTLRVVWDGRPLDDLATGLAERGH
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC
SLSPEQIASAANFISGAVLGAIFTGLDGHRTWADAATETVEWVLVGLGVSREEARNLAAG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC
DLPPLPE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA