| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289181
Identifier: 192289181
GI number: 192289181
Start: 794872
End: 795051
Strand: Reverse
Name: 192289181
Synonym: Rpal_0751
Alternate gene names: NA
Gene position: 795051-794872 (Counterclockwise)
Preceding gene: 192289183
Following gene: 192289177
Centisome position: 13.84
GC content: 59.44
Gene sequence:
>180_bases ATGAGTGACCACAAGGAACTCGAGCCTCAGGATTTCCCGATCGAAACCGATCAGACCGCGCTGAAGACCAGCGACGGTCA GCCGATCGCCGAAGCCAAAAGCAAGAAGCTCGCCGACGACATCGCCGACCGCCTTAACGAGCAGGCGTATCGTGAAGAGC AGGACTGCTGGTCCGCCTGA
Upstream 100 bases:
>100_bases GCGTATCGATTCCCATAGCGTCCGATATGTGGACAAAACTGCTCACCAAACTAAGCAACCGATTTGGGGGTGGTGCGTTG ACGGACAGGAGGAACTCGCC
Downstream 100 bases:
>100_bases CGCGGCGTCAGTCCTGCGCCGAGATGGTCTTGGCGAAGCGGATACGGCAGATCGCAAGCGTGACGACGCCGATAACGAGC AACGCCAGAAGTTGACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 58
Protein sequence:
>59_residues MSDHKELEPQDFPIETDQTALKTSDGQPIAEAKSKKLADDIADRLNEQAYREEQDCWSA
Sequences:
>Translated_59_residues MSDHKELEPQDFPIETDQTALKTSDGQPIAEAKSKKLADDIADRLNEQAYREEQDCWSA >Mature_58_residues SDHKELEPQDFPIETDQTALKTSDGQPIAEAKSKKLADDIADRLNEQAYREEQDCWSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6708; Mature: 6577
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDHKELEPQDFPIETDQTALKTSDGQPIAEAKSKKLADDIADRLNEQAYREEQDCWSA CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDHKELEPQDFPIETDQTALKTSDGQPIAEAKSKKLADDIADRLNEQAYREEQDCWSA CCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA