| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288615
Identifier: 192288615
GI number: 192288615
Start: 198031
End: 198432
Strand: Reverse
Name: 192288615
Synonym: Rpal_0182
Alternate gene names: NA
Gene position: 198432-198031 (Counterclockwise)
Preceding gene: 192288616
Following gene: 192288614
Centisome position: 3.45
GC content: 65.17
Gene sequence:
>402_bases ATGCCGCCGATGCCGACCGAGATCACGGTGCTGGGCTGGAGCGTGGTGCTGCTGATCGTGCAGATGTTCCTGGCTTCCAT CCCGACCACCATGGAGCTAGGCGGCGACTATCAGGCGGGTCCCCGAGACGAGCCACGAACGCCGACGGGGCGGTTTGCCG GCCGCGCCAACCGGGCCTTCCGCAATCTGCTCGAAACCTATCCGGCGTTCGTCGGTCTGGCGCTGGCTTTGGCGATCACC GGCAAGGCGGGCGGCTACGCTGCCACGGCCTCGGTGGTCTGGCTGATCGCCCGCGCATTGTATGCGCCGCTGTACATCAT CGAAATCCCGTTCGCCCGCAGCATTGTCTGGTTCGTGTCGCTGTTGGCGCTGATCGCGATGCTGGTCCGGCTATTGAGTT GA
Upstream 100 bases:
>100_bases GAGAGCCTGGAAGACCCGGCGCGCCTGGTGCTGGATCTCTGACACTGGAGTAAGTGCCGGCGGCGTGCTCCTGCGCGCCG CCCTGACCTTGGGGGAAACG
Downstream 100 bases:
>100_bases GGAGCCGATGAACGATCGCGTCGTCATCATCACCGGAGGCAGCCGCGGCATCGGCCGGGCCACTGCGCTGGGTTGTGCGA AGCGCGGCTTCAAGGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPPMPTEITVLGWSVVLLIVQMFLASIPTTMELGGDYQAGPRDEPRTPTGRFAGRANRAFRNLLETYPAFVGLALALAIT GKAGGYAATASVVWLIARALYAPLYIIEIPFARSIVWFVSLLALIAMLVRLLS
Sequences:
>Translated_133_residues MPPMPTEITVLGWSVVLLIVQMFLASIPTTMELGGDYQAGPRDEPRTPTGRFAGRANRAFRNLLETYPAFVGLALALAIT GKAGGYAATASVVWLIARALYAPLYIIEIPFARSIVWFVSLLALIAMLVRLLS >Mature_132_residues PPMPTEITVLGWSVVLLIVQMFLASIPTTMELGGDYQAGPRDEPRTPTGRFAGRANRAFRNLLETYPAFVGLALALAITG KAGGYAATASVVWLIARALYAPLYIIEIPFARSIVWFVSLLALIAMLVRLLS
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14423; Mature: 14292
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPMPTEITVLGWSVVLLIVQMFLASIPTTMELGGDYQAGPRDEPRTPTGRFAGRANRAF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RNLLETYPAFVGLALALAITGKAGGYAATASVVWLIARALYAPLYIIEIPFARSIVWFVS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH LLALIAMLVRLLS HHHHHHHHHHHHC >Mature Secondary Structure PPMPTEITVLGWSVVLLIVQMFLASIPTTMELGGDYQAGPRDEPRTPTGRFAGRANRAF CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RNLLETYPAFVGLALALAITGKAGGYAATASVVWLIARALYAPLYIIEIPFARSIVWFVS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHH LLALIAMLVRLLS HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA