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The map label for this gene is 192288498

Identifier: 192288498

GI number: 192288498

Start: 68564

End: 69238

Strand: Reverse

Name: 192288498

Synonym: Rpal_0065

Alternate gene names: NA

Gene position: 69238-68564 (Counterclockwise)

Preceding gene: 192288509

Following gene: 192288496

Centisome position: 1.21

GC content: 65.33

Gene sequence:

>675_bases
ATGGCCACGCCCGCTTTCGTCAAACGGATTACGCGATCAGATGCGGTCCTGTCGCTCGGCGTCAACTTTTCCAAGATCTA
TTTTAAGTTCGTGATGTGGACCGGCCGATACGATCGGCAGGCCGTTCCGATCCCCGAGCCTTACATCCTGGCGATGTGGC
ACGGGCGGCTGATCATGGCGCCGATGCTGCAGACCAAGAGCAAGCCGCTGGTCGCGCTGATCAGCGGACATCGCGACGGC
AAGATCATTTCCAGGGTCGGGGCCGCGTTCGGGATTCAGACCGCGGTCGGCTCAAGCTCCAAGGGCGGGATGCGGGCGGC
GCGCGAAATGATGCGGCTGGGCAAGTCCGGCCACAGCCTGTTCGTCACACCCGACGGCCCGCGCGGTCCGCGGATGCGCA
TCAACAGCGAGGGCGTTCTCGATCTGGCGCGGCTGACCGGGCTGCCGATCCTGCCGGTTTCGGTCAGCCTATCGCGTCAC
AAGCTGCTTCGGAGCTGGGATCGGCTGATGCTGCCGGGATTGTTCGCGAAGGTCGCGATCCGGTTCGGCGAGCCGATCAC
CGTCGAGGCTGGCTCGCCGACCGCAGAGATGGCGGAGCGGCTGCAGGCGGCTCTGACCGCCGCGCAGAACGAAACCGACC
GGATCGTCGGCCTTCAGCCGGTCGAAGTGGCCTGA

Upstream 100 bases:

>100_bases
CGGTGGTTTGCAGCCGTGAACGACTGGGTATAAATCCGCGATCCGCCGAAGCCAGCCTCGTTGGCGATTTCCTATCAATC
TCTGCCCGGACCCTGCCTGG

Downstream 100 bases:

>100_bases
GGCTCAGCCGAATTCCGCGCCGAGCCGCTGCATCATCGGAACGAAGTCCGGGAAGCTGGTGGCGATGAAGGCGGTGTCAT
CGACCGTCACCGGCTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MATPAFVKRITRSDAVLSLGVNFSKIYFKFVMWTGRYDRQAVPIPEPYILAMWHGRLIMAPMLQTKSKPLVALISGHRDG
KIISRVGAAFGIQTAVGSSSKGGMRAAREMMRLGKSGHSLFVTPDGPRGPRMRINSEGVLDLARLTGLPILPVSVSLSRH
KLLRSWDRLMLPGLFAKVAIRFGEPITVEAGSPTAEMAERLQAALTAAQNETDRIVGLQPVEVA

Sequences:

>Translated_224_residues
MATPAFVKRITRSDAVLSLGVNFSKIYFKFVMWTGRYDRQAVPIPEPYILAMWHGRLIMAPMLQTKSKPLVALISGHRDG
KIISRVGAAFGIQTAVGSSSKGGMRAAREMMRLGKSGHSLFVTPDGPRGPRMRINSEGVLDLARLTGLPILPVSVSLSRH
KLLRSWDRLMLPGLFAKVAIRFGEPITVEAGSPTAEMAERLQAALTAAQNETDRIVGLQPVEVA
>Mature_223_residues
ATPAFVKRITRSDAVLSLGVNFSKIYFKFVMWTGRYDRQAVPIPEPYILAMWHGRLIMAPMLQTKSKPLVALISGHRDGK
IISRVGAAFGIQTAVGSSSKGGMRAAREMMRLGKSGHSLFVTPDGPRGPRMRINSEGVLDLARLTGLPILPVSVSLSRHK
LLRSWDRLMLPGLFAKVAIRFGEPITVEAGSPTAEMAERLQAALTAAQNETDRIVGLQPVEVA

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 24417; Mature: 24286

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPAFVKRITRSDAVLSLGVNFSKIYFKFVMWTGRYDRQAVPIPEPYILAMWHGRLIMA
CCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEH
PMLQTKSKPLVALISGHRDGKIISRVGAAFGIQTAVGSSSKGGMRAAREMMRLGKSGHSL
HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEE
FVTPDGPRGPRMRINSEGVLDLARLTGLPILPVSVSLSRHKLLRSWDRLMLPGLFAKVAI
EEECCCCCCCCEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RFGEPITVEAGSPTAEMAERLQAALTAAQNETDRIVGLQPVEVA
HCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
>Mature Secondary Structure 
ATPAFVKRITRSDAVLSLGVNFSKIYFKFVMWTGRYDRQAVPIPEPYILAMWHGRLIMA
CCHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEH
PMLQTKSKPLVALISGHRDGKIISRVGAAFGIQTAVGSSSKGGMRAAREMMRLGKSGHSL
HHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEE
FVTPDGPRGPRMRINSEGVLDLARLTGLPILPVSVSLSRHKLLRSWDRLMLPGLFAKVAI
EEECCCCCCCCEEECCCCCHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RFGEPITVEAGSPTAEMAERLQAALTAAQNETDRIVGLQPVEVA
HCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]