Click here to switch to the map view.

The map label for this gene is 192288496

Identifier: 192288496

GI number: 192288496

Start: 66681

End: 67082

Strand: Reverse

Name: 192288496

Synonym: Rpal_0063

Alternate gene names: NA

Gene position: 67082-66681 (Counterclockwise)

Preceding gene: 192288498

Following gene: 192288495

Centisome position: 1.17

GC content: 59.95

Gene sequence:

>402_bases
GTGGCGAAATCCGATCTCGGAACCAAACGCATTTGCCCGACGACGGGCAAAAAGTTCTACGATCTGAACAAGAATCCTGT
GATCTCGCCCTACACCGGCGAGGTGGTGCCGATTGCACCGGTCACGGCGCCGCGCACTCGTGCGGATCAGCGCTCCCCTG
TCGTGGACACCGAGGCGCCCGAGGCGATGGAGGCCGAAGAGCTGGTGTCGCTGGAAGAGGCCGATGCCGAGGAGAACACC
GGCAAGGTCAAGGCCGTGGTGCCGGAATCCGAGGACGACATCGAAATCGACGAGGCGATCGACGACGATGACGACGATTC
GACCTTCATCGCCGACGAAGAAGAAGAGGATGAAGACGTCACGGACATCATTGGTGACGTTTCTGGCGATGAGGAGACTT
GA

Upstream 100 bases:

>100_bases
TCGCGGCGCCTCGCGGCCTTCGGCATAAACCGCTATTGACAGCGGCGTGCCAACTAGCCAAGTGAAGCACCGTTTTTCAA
GAAATCCCAAGGTTGCACAA

Downstream 100 bases:

>100_bases
GATCGTCGCCGATATGTGATCAACGATTGCCGCGCGGCCGATTTTGATTTGCGCCGCGCACCCAGGGTAAGGGGCCATAG
CTCAGCTGGGAGAGCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTRADQRSPVVDTEAPEAMEAEELVSLEEADAEENT
GKVKAVVPESEDDIEIDEAIDDDDDDSTFIADEEEEDEDVTDIIGDVSGDEET

Sequences:

>Translated_133_residues
MAKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTRADQRSPVVDTEAPEAMEAEELVSLEEADAEENT
GKVKAVVPESEDDIEIDEAIDDDDDDSTFIADEEEEDEDVTDIIGDVSGDEET
>Mature_132_residues
AKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTRADQRSPVVDTEAPEAMEAEELVSLEEADAEENTG
KVKAVVPESEDDIEIDEAIDDDDDDSTFIADEEEEDEDVTDIIGDVSGDEET

Specific function: Unknown

COG id: COG4530

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14462; Mature: 14330

Theoretical pI: Translated: 3.59; Mature: 3.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTRADQRSPVVDTEAP
CCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
EAMEAEELVSLEEADAEENTGKVKAVVPESEDDIEIDEAIDDDDDDSTFIADEEEEDEDV
CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEECCCCCCHHH
TDIIGDVSGDEET
HHHHHCCCCCCCC
>Mature Secondary Structure 
AKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTRADQRSPVVDTEAP
CCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
EAMEAEELVSLEEADAEENTGKVKAVVPESEDDIEIDEAIDDDDDDSTFIADEEEEDEDV
CCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCEEEECCCCCCHHH
TDIIGDVSGDEET
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA