Click here to switch to the map view.

The map label for this gene is 192288448

Identifier: 192288448

GI number: 192288448

Start: 16465

End: 16965

Strand: Reverse

Name: 192288448

Synonym: Rpal_0015

Alternate gene names: NA

Gene position: 16965-16465 (Counterclockwise)

Preceding gene: 192288449

Following gene: 192288447

Centisome position: 0.3

GC content: 65.47

Gene sequence:

>501_bases
ATGAGCCGTTCGAAATCATCGCCGCGTCCTCTCACCGGCAAAGTCGTTCTCGCCGTGCTGGTGGCGTTCTTCGGCATCGT
GTTCGGCGTCAACGGACTGATGATGACGCTGGCAATCAAGACGCTGCCGGGCACCGAAGTCGACAGTGCCTACGCAGCCA
GCCTCGCTTACGAGCGTGAGATCGCAGCCGCGCGTGATCAGGATCAGCGCGGCTGGAAGGTCGAAGCCAAGGTCGAGCGC
AAGCCCGATGGCGCCGCCGTGCTGCAGGTCGAGGCCCGTGACAAGGCCGGCCTGCCGCTGGCCGGTCTGAACTTCTTCGG
CCGGCTGGAGCGGCCGTCCGACAAGCGCTACGACCGCGAGGTTGCGCTCGCGGAGGTCGGCAGCGGCGTGTACCGCGGCG
ACGCCGATGGCGTGCTGCCGGGCCGTTGGGATCTGGTTCTGGAAGGGGATCAGGGCGGCGTTCGCATGTTCCTCTCCAAG
AACAAGCTGCTGTTGAACTAA

Upstream 100 bases:

>100_bases
TCGGTGCCGGTGACTTTCCATGTCACCGATATCGGGCTGGGTGAGGTCGCCTCCACCAAGGACGTCTTTGTTACGCCCTG
ATCCGAACCGGAGCCTTATG

Downstream 100 bases:

>100_bases
GCGCCGATCCGGCAGGCGTGACGAGGATCGCCGAATGCTGCAGACGCGGGATTTCTCTCACTACGTCAAAGACGTCGACG
GCCGGATCGCGCATCTCGAC

Product: FixH family protein

Products: NA

Alternate protein names: Nitrogen Fixation Protein FixH; FixH Protein; Integral Membrane Protein Linked A Cation Pump-Like; FixH Superfamily; Cation Pump-Linked Membrane Protein FixH; Ferredoxin; Integral Membrane Protein Linked A Cation Pump

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSRSKSSPRPLTGKVVLAVLVAFFGIVFGVNGLMMTLAIKTLPGTEVDSAYAASLAYEREIAAARDQDQRGWKVEAKVER
KPDGAAVLQVEARDKAGLPLAGLNFFGRLERPSDKRYDREVALAEVGSGVYRGDADGVLPGRWDLVLEGDQGGVRMFLSK
NKLLLN

Sequences:

>Translated_166_residues
MSRSKSSPRPLTGKVVLAVLVAFFGIVFGVNGLMMTLAIKTLPGTEVDSAYAASLAYEREIAAARDQDQRGWKVEAKVER
KPDGAAVLQVEARDKAGLPLAGLNFFGRLERPSDKRYDREVALAEVGSGVYRGDADGVLPGRWDLVLEGDQGGVRMFLSK
NKLLLN
>Mature_165_residues
SRSKSSPRPLTGKVVLAVLVAFFGIVFGVNGLMMTLAIKTLPGTEVDSAYAASLAYEREIAAARDQDQRGWKVEAKVERK
PDGAAVLQVEARDKAGLPLAGLNFFGRLERPSDKRYDREVALAEVGSGVYRGDADGVLPGRWDLVLEGDQGGVRMFLSKN
KLLLN

Specific function: Unknown

COG id: COG5456

COG function: function code P; Predicted integral membrane protein linked to a cation pump

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17979; Mature: 17848

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSKSSPRPLTGKVVLAVLVAFFGIVFGVNGLMMTLAIKTLPGTEVDSAYAASLAYERE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHHHHHHH
IAAARDQDQRGWKVEAKVERKPDGAAVLQVEARDKAGLPLAGLNFFGRLERPSDKRYDRE
HHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHCCCCCCCCCHHHHH
VALAEVGSGVYRGDADGVLPGRWDLVLEGDQGGVRMFLSKNKLLLN
HHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEECCEEECC
>Mature Secondary Structure 
SRSKSSPRPLTGKVVLAVLVAFFGIVFGVNGLMMTLAIKTLPGTEVDSAYAASLAYERE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCHHHHHHHHHHHH
IAAARDQDQRGWKVEAKVERKPDGAAVLQVEARDKAGLPLAGLNFFGRLERPSDKRYDRE
HHHHCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHCCCCCCCCCHHHHH
VALAEVGSGVYRGDADGVLPGRWDLVLEGDQGGVRMFLSKNKLLLN
HHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA