| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is fixG [H]
Identifier: 192288449
GI number: 192288449
Start: 16985
End: 18442
Strand: Reverse
Name: fixG [H]
Synonym: Rpal_0016
Alternate gene names: 192288449
Gene position: 18442-16985 (Counterclockwise)
Preceding gene: 192288450
Following gene: 192288448
Centisome position: 0.32
GC content: 62.76
Gene sequence:
>1458_bases ATGAATAAGCCCCTGCGCGCGACGGACCTGCAGCCGGACGACGACGGCCCGCTGTACACGGCCCAAAAGAAAATCTTCCC CCAAAGCGTGTCCGGCCCGTTCCGGCGAATCAAATGGATCCTGATGGCGGTCTGCCTCGGGATCTATTACTTTTTGCCCT TCGTGCGATGGAACCGCGGTCTCGGCGCGCCCGATCAGGCGGTGCTGATCGACCTCGCCAACAACCGGTTCTACTTCTTC GCCATCGAACTGTGGCCGCAGGAAATCTATTACTTCACCGGCCTGTTGATCGTCGCCGCCATCGTGCTGTTCCTGATGAA CGCCCTCGGCGGCCGGGTATGGTGCGGTTATTTGTGCCCGCAGACGGTCTGGACCGATCTGTTCTACGCGGTCGAACGGT TCGTCGAAGGCGATCGACGCGAGCGGATGCGCAAGGCCGGCGAAGGCTTCAAGATGCAGCGCGCAGCGGAACTCGCGCTC AAGCACTCGATCTGGCTGATGATCGCGTGGTGGACCGGCGGCGCCTGGGTTCTGTACTTCGCCGACGCTCCGACCCTGAT CAAGGAACTGGTCACCTTCGATGCGCCGATGGTGGCGTATATCTGGATCGGCATCCTTACCTTCACCACCTACACGCTGG CCGGCTTCATGCGCGAGCAGGTCTGCGTCTACATGTGCCCGTGGCCCCGCATTCAGGCAGCGCTGACCGACGAATGGGCG CTCAACGTCACCTATAAGTACGATCGCGGCGAGAAGCGTTCGTCGCTCAAGAAGGCGGCTCAGCTCCGGGCGCTCGGTGA GCCGGTCGGCGATTGCGTCGACTGCAACCAGTGCGTGGCCGTCTGCCCAACCGGCATCGACATCCGCAACGGACCGCAGC TCGACTGCATCCAGTGCGGCCTGTGCATCGACGCCTGCGACAATGTGATGACGAAGATCGGTCGTCCGACCCGGCTGATC GGCTACGACAACGACATCAACATCCATCGCCGGATGGAGGGCAAGCCGGAGATCTTCAAGCCGGTCCGCGCCCGTACCGT GATCTACTCGCTGATCATCGTCGCGATCGGTGGTGCGATGCTGTACAAGCTGGCGACCCGCAGCCTGCTCGACGTCAACG TCCTGCACGACCGCAACCCGGTCGCGGTGCGGCTGTCGGACGGATCGGTGCGTAACGGCTACACCATCCGCTTCCTCAAC AAGCGCGGCTTCGACCGCGTGGTGGCGGTCGACGTCGAAGGTCCGCCGAATGCGATGATCCACATCGTCGGTGCGGACTC GATCACGCCGGCCCGGCCAATGATCATCCTCGGCCGCGACACCACCACCGAGCTGCGGGTGCTGGTCGACTCCAACACAA ACGATGACGTGCCGCAATCGGTGCCGGTGACTTTCCATGTCACCGATATCGGGCTGGGTGAGGTCGCCTCCACCAAGGAC GTCTTTGTTACGCCCTGA
Upstream 100 bases:
>100_bases CGCAGAACCTCGTGTGTTGGGGGACACGCGAGGTTGTGATCTGCGCGCCCGGAATTGAGCTTGCGCTCGACGATAGAAGA AGTGGAAAAGAACCCTCGAT
Downstream 100 bases:
>100_bases TCCGAACCGGAGCCTTATGATGAGCCGTTCGAAATCATCGCCGCGTCCTCTCACCGGCAAAGTCGTTCTCGCCGTGCTGG TGGCGTTCTTCGGCATCGTG
Product: cytochrome C oxidase accessory protein CcoG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNKPLRATDLQPDDDGPLYTAQKKIFPQSVSGPFRRIKWILMAVCLGIYYFLPFVRWNRGLGAPDQAVLIDLANNRFYFF AIELWPQEIYYFTGLLIVAAIVLFLMNALGGRVWCGYLCPQTVWTDLFYAVERFVEGDRRERMRKAGEGFKMQRAAELAL KHSIWLMIAWWTGGAWVLYFADAPTLIKELVTFDAPMVAYIWIGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWA LNVTYKYDRGEKRSSLKKAAQLRALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLI GYDNDINIHRRMEGKPEIFKPVRARTVIYSLIIVAIGGAMLYKLATRSLLDVNVLHDRNPVAVRLSDGSVRNGYTIRFLN KRGFDRVVAVDVEGPPNAMIHIVGADSITPARPMIILGRDTTTELRVLVDSNTNDDVPQSVPVTFHVTDIGLGEVASTKD VFVTP
Sequences:
>Translated_485_residues MNKPLRATDLQPDDDGPLYTAQKKIFPQSVSGPFRRIKWILMAVCLGIYYFLPFVRWNRGLGAPDQAVLIDLANNRFYFF AIELWPQEIYYFTGLLIVAAIVLFLMNALGGRVWCGYLCPQTVWTDLFYAVERFVEGDRRERMRKAGEGFKMQRAAELAL KHSIWLMIAWWTGGAWVLYFADAPTLIKELVTFDAPMVAYIWIGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWA LNVTYKYDRGEKRSSLKKAAQLRALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLI GYDNDINIHRRMEGKPEIFKPVRARTVIYSLIIVAIGGAMLYKLATRSLLDVNVLHDRNPVAVRLSDGSVRNGYTIRFLN KRGFDRVVAVDVEGPPNAMIHIVGADSITPARPMIILGRDTTTELRVLVDSNTNDDVPQSVPVTFHVTDIGLGEVASTKD VFVTP >Mature_485_residues MNKPLRATDLQPDDDGPLYTAQKKIFPQSVSGPFRRIKWILMAVCLGIYYFLPFVRWNRGLGAPDQAVLIDLANNRFYFF AIELWPQEIYYFTGLLIVAAIVLFLMNALGGRVWCGYLCPQTVWTDLFYAVERFVEGDRRERMRKAGEGFKMQRAAELAL KHSIWLMIAWWTGGAWVLYFADAPTLIKELVTFDAPMVAYIWIGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWA LNVTYKYDRGEKRSSLKKAAQLRALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLI GYDNDINIHRRMEGKPEIFKPVRARTVIYSLIIVAIGGAMLYKLATRSLLDVNVLHDRNPVAVRLSDGSVRNGYTIRFLN KRGFDRVVAVDVEGPPNAMIHIVGADSITPARPMIILGRDTTTELRVLVDSNTNDDVPQSVPVTFHVTDIGLGEVASTKD VFVTP
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54598; Mature: 54598
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPLRATDLQPDDDGPLYTAQKKIFPQSVSGPFRRIKWILMAVCLGIYYFLPFVRWNRG CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LGAPDQAVLIDLANNRFYFFAIELWPQEIYYFTGLLIVAAIVLFLMNALGGRVWCGYLCP CCCCCCEEEEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCH QTVWTDLFYAVERFVEGDRRERMRKAGEGFKMQRAAELALKHSIWLMIAWWTGGAWVLYF HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEE ADAPTLIKELVTFDAPMVAYIWIGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHEECCCEE LNVTYKYDRGEKRSSLKKAAQLRALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCG EEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCHHHHH LCIDACDNVMTKIGRPTRLIGYDNDINIHRRMEGKPEIFKPVRARTVIYSLIIVAIGGAM HHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYKLATRSLLDVNVLHDRNPVAVRLSDGSVRNGYTIRFLNKRGFDRVVAVDVEGPPNAMI HHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEE HIVGADSITPARPMIILGRDTTTELRVLVDSNTNDDVPQSVPVTFHVTDIGLGEVASTKD EEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC VFVTP EEECC >Mature Secondary Structure MNKPLRATDLQPDDDGPLYTAQKKIFPQSVSGPFRRIKWILMAVCLGIYYFLPFVRWNRG CCCCCCCCCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC LGAPDQAVLIDLANNRFYFFAIELWPQEIYYFTGLLIVAAIVLFLMNALGGRVWCGYLCP CCCCCCEEEEEEECCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCH QTVWTDLFYAVERFVEGDRRERMRKAGEGFKMQRAAELALKHSIWLMIAWWTGGAWVLYF HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEEECCCEEEEEE ADAPTLIKELVTFDAPMVAYIWIGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWA CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHEECCCEE LNVTYKYDRGEKRSSLKKAAQLRALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCG EEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCCCCCHHHHH LCIDACDNVMTKIGRPTRLIGYDNDINIHRRMEGKPEIFKPVRARTVIYSLIIVAIGGAM HHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYKLATRSLLDVNVLHDRNPVAVRLSDGSVRNGYTIRFLNKRGFDRVVAVDVEGPPNAMI HHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCCCEEE HIVGADSITPARPMIILGRDTTTELRVLVDSNTNDDVPQSVPVTFHVTDIGLGEVASTKD EEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC VFVTP EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]