| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is fixI [H]
Identifier: 192288447
GI number: 192288447
Start: 14232
End: 16430
Strand: Reverse
Name: fixI [H]
Synonym: Rpal_0014
Alternate gene names: 192288447
Gene position: 16430-14232 (Counterclockwise)
Preceding gene: 192288448
Following gene: 192288446
Centisome position: 0.29
GC content: 67.44
Gene sequence:
>2199_bases ATGCTGCAGACGCGGGATTTCTCTCACTACGTCAAAGACGTCGACGGCCGGATCGCGCATCTCGACCTCGCGGTGGAAGG CGTTCACTGCGCCAGCTGCATGGCCAAGATCGAGCGCGGCCTGCAATCGATTCCGGATGTGACGCTCGCCCGCGTCAATC TCACCGATCGTCGCCTTGCGGTGGAGTGGAACAAGGGCAGCACGCTGGAGCCCGGCCAGTTCATCGATCGCCTCGCCGAG CTCGGCTACAAGGCCTATCCGTATGAGCCGGTGCGGGCCGAGGTCGAAGAGGCCGAACGCACCAAGTTCCTGCTCCGCTG CCTCGGCGTCGCCGTGTTCGCCACGATGAACGTGATGATGCTGTCGGTGCCGGTGTGGTACGGCGGCGATCTCAGTCCCG AGGCTCGCGACTTCTTCCATTGGTTGTCGGCGCTGGTCGCTCTGCCCTGTGCCGCCTATGCGGGGCAGCCGTTCTTCCAG TCGGCGTTCCGCGCGCTGAAGGCCAAGAGCGTGAACATGGATGTGCCGATCACGATCGGCATCACGCTGGCGCTCGGCAT GTCGCTGGTCGAGACCATCAATCACGCCGAGCACGCTTACTTCGACGCCGCTGTGATGCTGATCGCGTTCCTGCTGGCGG GCCGCTTCCTCGATCAGAAGATGCGGCAGAAGACCCGCGCGGTTGCGGGTAACCTCGCAGCACTGAAGGCCGAGACCGCC ACCAAGTTCGTCGGGCCCGACGAAATCAGCGAAGTGCCGATCGCCGCAGTGCGTGCCGGCGACATCGTGCTGCTGCGCCC CGGCGAACGCTGCGCGGTCGACGGCACGGTGATCGAGGGCCGCTCCGAGATCGACCAGAGCCTGATCACCGGCGAGACGC TGTATGTGCCGGCCGAACGCGGCACCCAGGTTTATGCCGGCACGCTCAACATCTCCGGTACCCTGCGCGTCCGCGTCGCT GCGGCCGCAGAGGGCACGCTGCTGTCCGAGATCACCCGGCTGCTCGACCACGCGCTGCAGGCGCGTTCGCGCTACGTCCG GCTCGCGGACCGCGCCTCCCAGCTCTATGCGCCGGTGGTGCACGCGACCGCGCTGCTGACGATCATCGGCTGGGTCCTGG CCGGTGCGAGCTGGCACGATGCGATCGTGATCGGCATTGCGGTTCTGATCATCACCTGTCCCTGCGCGCTCGGCCTCGCG ATTCCTGCGGTGCAGACCGTCGCCTCCGGCGCGATGTTCCGCGCCGGCGTGCTGCTCAATGCGGGCGACGCGATCGAGCG CGCCGCTTCGGTCGACACCATCGTGTTCGACAAGACCGGTACGCTGACGCTGCCCGAGCTCGACGTCGTCAACGCCGCCG GCATCCCGCTCGAGGTGTTCGACCTCGCCGGCCGGCTCGCCCTCGCCAGCCATCATCCGGTCGCCGCTGCGGTGGCGCGT GCCGCGCACGCCAAGTCGCCGCTGCCGAATGTGGTCGAAGAACCGGGCCGCGGCGTTCGGACGGTGTTCGGCGGCCAAGA ATTACGCCTCGGCAGCCCGGCGTTCTGCGGCGCCGATGCCGAAGCCAATCAGATCCTCAGCGAAGACCCCGAAGTGTCCG TGGTGGCGTTCAGCCGCGGCGAGCAGAGGGTGGTATTCGCGGTCCGCCAGTTGCTGCGGCCCGACGCCGCCAAGACGATC GACGCCCTGACCAATCGCGGCATTGCGGTCGAGCTCTTGTCCGGCGATCGCGAGCCGGCGGTTCGCCACGCGGCGGCTGC GCTTGGTGTATCCGCCTGGCGCGCCAGCGTGACGCCGGCCGAGAAGATTGCTCACATCGAGGCGCTGAAGAAGCAGGGCC GCATCGTGATGATGGTCGGCGACGGTATGAACGACGCACCGTCGCTCGCCGCGGCGCATGTCTCGATGTCGCCGATCAGC GCCACGCATCTCAGCCAGGCCACCGCCGATCTGGTGTTCCTCGGCAAGGAGCTTGCGCCGGTGCTGGCCGCGGTCGATTA TTCGCGGAAAGCGATGGCGGTGATGCGGGAGAATCTCGGTCTTGCCATCGGCTATAACGTACTGGCGGTGCCGATCGCGA TCGCCGGCTATGCCACACCGCTGATCGCGGCGCTGGCGATGTCCGGATCGTCGCTGCTGGTGATGCTGAACGCGATGCGG GCGCGCCGCGTCCGCCGGGGAGCCGCGTCGTGGAAGTAA
Upstream 100 bases:
>100_bases GTTCTGGAAGGGGATCAGGGCGGCGTTCGCATGTTCCTCTCCAAGAACAAGCTGCTGTTGAACTAAGCGCCGATCCGGCA GGCGTGACGAGGATCGCCGA
Downstream 100 bases:
>100_bases TGGTGATCCTCGTCCCGCTGGCGCTCGGTCTCGGCCTGCTGGGATTGGTCGCGTTTCTGTGGTCGCTGAAGAGCGGCCAG TATGAAGATCTCGACGGAGC
Product: ATPase P
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MLQTRDFSHYVKDVDGRIAHLDLAVEGVHCASCMAKIERGLQSIPDVTLARVNLTDRRLAVEWNKGSTLEPGQFIDRLAE LGYKAYPYEPVRAEVEEAERTKFLLRCLGVAVFATMNVMMLSVPVWYGGDLSPEARDFFHWLSALVALPCAAYAGQPFFQ SAFRALKAKSVNMDVPITIGITLALGMSLVETINHAEHAYFDAAVMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETA TKFVGPDEISEVPIAAVRAGDIVLLRPGERCAVDGTVIEGRSEIDQSLITGETLYVPAERGTQVYAGTLNISGTLRVRVA AAAEGTLLSEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTIIGWVLAGASWHDAIVIGIAVLIITCPCALGLA IPAVQTVASGAMFRAGVLLNAGDAIERAASVDTIVFDKTGTLTLPELDVVNAAGIPLEVFDLAGRLALASHHPVAAAVAR AAHAKSPLPNVVEEPGRGVRTVFGGQELRLGSPAFCGADAEANQILSEDPEVSVVAFSRGEQRVVFAVRQLLRPDAAKTI DALTNRGIAVELLSGDREPAVRHAAAALGVSAWRASVTPAEKIAHIEALKKQGRIVMMVGDGMNDAPSLAAAHVSMSPIS ATHLSQATADLVFLGKELAPVLAAVDYSRKAMAVMRENLGLAIGYNVLAVPIAIAGYATPLIAALAMSGSSLLVMLNAMR ARRVRRGAASWK
Sequences:
>Translated_732_residues MLQTRDFSHYVKDVDGRIAHLDLAVEGVHCASCMAKIERGLQSIPDVTLARVNLTDRRLAVEWNKGSTLEPGQFIDRLAE LGYKAYPYEPVRAEVEEAERTKFLLRCLGVAVFATMNVMMLSVPVWYGGDLSPEARDFFHWLSALVALPCAAYAGQPFFQ SAFRALKAKSVNMDVPITIGITLALGMSLVETINHAEHAYFDAAVMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETA TKFVGPDEISEVPIAAVRAGDIVLLRPGERCAVDGTVIEGRSEIDQSLITGETLYVPAERGTQVYAGTLNISGTLRVRVA AAAEGTLLSEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTIIGWVLAGASWHDAIVIGIAVLIITCPCALGLA IPAVQTVASGAMFRAGVLLNAGDAIERAASVDTIVFDKTGTLTLPELDVVNAAGIPLEVFDLAGRLALASHHPVAAAVAR AAHAKSPLPNVVEEPGRGVRTVFGGQELRLGSPAFCGADAEANQILSEDPEVSVVAFSRGEQRVVFAVRQLLRPDAAKTI DALTNRGIAVELLSGDREPAVRHAAAALGVSAWRASVTPAEKIAHIEALKKQGRIVMMVGDGMNDAPSLAAAHVSMSPIS ATHLSQATADLVFLGKELAPVLAAVDYSRKAMAVMRENLGLAIGYNVLAVPIAIAGYATPLIAALAMSGSSLLVMLNAMR ARRVRRGAASWK >Mature_732_residues MLQTRDFSHYVKDVDGRIAHLDLAVEGVHCASCMAKIERGLQSIPDVTLARVNLTDRRLAVEWNKGSTLEPGQFIDRLAE LGYKAYPYEPVRAEVEEAERTKFLLRCLGVAVFATMNVMMLSVPVWYGGDLSPEARDFFHWLSALVALPCAAYAGQPFFQ SAFRALKAKSVNMDVPITIGITLALGMSLVETINHAEHAYFDAAVMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETA TKFVGPDEISEVPIAAVRAGDIVLLRPGERCAVDGTVIEGRSEIDQSLITGETLYVPAERGTQVYAGTLNISGTLRVRVA AAAEGTLLSEITRLLDHALQARSRYVRLADRASQLYAPVVHATALLTIIGWVLAGASWHDAIVIGIAVLIITCPCALGLA IPAVQTVASGAMFRAGVLLNAGDAIERAASVDTIVFDKTGTLTLPELDVVNAAGIPLEVFDLAGRLALASHHPVAAAVAR AAHAKSPLPNVVEEPGRGVRTVFGGQELRLGSPAFCGADAEANQILSEDPEVSVVAFSRGEQRVVFAVRQLLRPDAAKTI DALTNRGIAVELLSGDREPAVRHAAAALGVSAWRASVTPAEKIAHIEALKKQGRIVMMVGDGMNDAPSLAAAHVSMSPIS ATHLSQATADLVFLGKELAPVLAAVDYSRKAMAVMRENLGLAIGYNVLAVPIAIAGYATPLIAALAMSGSSLLVMLNAMR ARRVRRGAASWK
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=799, Percent_Identity=25.531914893617, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI115529486, Length=781, Percent_Identity=26.5044814340589, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI55743073, Length=289, Percent_Identity=31.1418685121107, Blast_Score=125, Evalue=2e-28, Organism=Escherichia coli, GI1786691, Length=748, Percent_Identity=31.0160427807487, Blast_Score=260, Evalue=3e-70, Organism=Escherichia coli, GI1789879, Length=713, Percent_Identity=28.4712482468443, Blast_Score=198, Evalue=8e-52, Organism=Escherichia coli, GI1786914, Length=517, Percent_Identity=26.4990328820116, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17556548, Length=721, Percent_Identity=26.4909847434119, Blast_Score=162, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6319772, Length=625, Percent_Identity=30.08, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320475, Length=621, Percent_Identity=27.3752012882448, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6321430, Length=511, Percent_Identity=24.26614481409, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6325221, Length=550, Percent_Identity=23.8181818181818, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI221329854, Length=555, Percent_Identity=29.7297297297297, Blast_Score=184, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 77832; Mature: 77832
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQTRDFSHYVKDVDGRIAHLDLAVEGVHCASCMAKIERGLQSIPDVTLARVNLTDRRLA CCCCCCHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEE VEWNKGSTLEPGQFIDRLAELGYKAYPYEPVRAEVEEAERTKFLLRCLGVAVFATMNVMM EEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVPVWYGGDLSPEARDFFHWLSALVALPCAAYAGQPFFQSAFRALKAKSVNMDVPITIG HEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEH ITLALGMSLVETINHAEHAYFDAAVMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TKFVGPDEISEVPIAAVRAGDIVLLRPGERCAVDGTVIEGRSEIDQSLITGETLYVPAER HHCCCCCHHCCCCEEEEECCCEEEECCCCCEEECCEEECCHHHHHHHHHCCCEEEEECCC GTQVYAGTLNISGTLRVRVAAAAEGTLLSEITRLLDHALQARSRYVRLADRASQLYAPVV CCEEEEEEEEECEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HATALLTIIGWVLAGASWHDAIVIGIAVLIITCPCALGLAIPAVQTVASGAMFRAGVLLN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEE AGDAIERAASVDTIVFDKTGTLTLPELDVVNAAGIPLEVFDLAGRLALASHHPVAAAVAR CCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHHCHHEECCCCCHHHHHHH AAHAKSPLPNVVEEPGRGVRTVFGGQELRLGSPAFCGADAEANQILSEDPEVSVVAFSRG HHHCCCCCCHHHHCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCC EQRVVFAVRQLLRPDAAKTIDALTNRGIAVELLSGDREPAVRHAAAALGVSAWRASVTPA CHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHH EKIAHIEALKKQGRIVMMVGDGMNDAPSLAAAHVSMSPISATHLSQATADLVFLGKELAP HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH VLAAVDYSRKAMAVMRENLGLAIGYNVLAVPIAIAGYATPLIAALAMSGSSLLVMLNAMR HHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARRVRRGAASWK HHHHHHCCCCCC >Mature Secondary Structure MLQTRDFSHYVKDVDGRIAHLDLAVEGVHCASCMAKIERGLQSIPDVTLARVNLTDRRLA CCCCCCHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEE VEWNKGSTLEPGQFIDRLAELGYKAYPYEPVRAEVEEAERTKFLLRCLGVAVFATMNVMM EEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVPVWYGGDLSPEARDFFHWLSALVALPCAAYAGQPFFQSAFRALKAKSVNMDVPITIG HEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEH ITLALGMSLVETINHAEHAYFDAAVMLIAFLLAGRFLDQKMRQKTRAVAGNLAALKAETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TKFVGPDEISEVPIAAVRAGDIVLLRPGERCAVDGTVIEGRSEIDQSLITGETLYVPAER HHCCCCCHHCCCCEEEEECCCEEEECCCCCEEECCEEECCHHHHHHHHHCCCEEEEECCC GTQVYAGTLNISGTLRVRVAAAAEGTLLSEITRLLDHALQARSRYVRLADRASQLYAPVV CCEEEEEEEEECEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HATALLTIIGWVLAGASWHDAIVIGIAVLIITCPCALGLAIPAVQTVASGAMFRAGVLLN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEE AGDAIERAASVDTIVFDKTGTLTLPELDVVNAAGIPLEVFDLAGRLALASHHPVAAAVAR CCHHHHHHHCCCEEEEECCCCEECCCCCCCCCCCCCHHHHHHHCHHEECCCCCHHHHHHH AAHAKSPLPNVVEEPGRGVRTVFGGQELRLGSPAFCGADAEANQILSEDPEVSVVAFSRG HHHCCCCCCHHHHCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCC EQRVVFAVRQLLRPDAAKTIDALTNRGIAVELLSGDREPAVRHAAAALGVSAWRASVTPA CHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHH EKIAHIEALKKQGRIVMMVGDGMNDAPSLAAAHVSMSPISATHLSQATADLVFLGKELAP HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHH VLAAVDYSRKAMAVMRENLGLAIGYNVLAVPIAIAGYATPLIAALAMSGSSLLVMLNAMR HHHHHCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ARRVRRGAASWK HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661920; 12597275 [H]