| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895239
Identifier: 190895239
GI number: 190895239
Start: 1000424
End: 1000960
Strand: Reverse
Name: 190895239
Synonym: RHECIAT_PC0000912
Alternate gene names: NA
Gene position: 1000960-1000424 (Counterclockwise)
Preceding gene: 190895242
Following gene: 190895238
Centisome position: 91.7
GC content: 59.22
Gene sequence:
>537_bases ATGAAAAACCTTCTGCTGAATATCCTGCTTGCCACCTGCTGCACAATGTCACCCTATCTTATTTCCGGCGATAAAGCGCG GGCCGAAGATTGGGGATGCCAGGTTATCCTATGCCTTTCCAATCCCGGCGGGCCGACACAATATGCCGAATGCCGGCCGC CGATCCAGAAACTGTGGCGGGAGCTCGCGGAGGGGCATCCTTTCCCGACGTGCAGCGGCGTTGGTTTTCAGAGTTCACGG CCGGGTTATGAGCCTTATTATTGCGATGACGGCTACAAGCTGACGAACGACGTGGGTCCCGGCGGGCGGCAAGCAACTTG CGTGTCGATATCGCCGCAGCCGGTGAGCAACAGCCTCTGCTGGAATGGCGACGATTACACTTCCCGCGGCAATTCGGTCC TGTTGCCACATTGGCAGCCCGTCGAGGGGCGCCGCCAATGCCTAGGCTACACGATGGTGCGCCCCAATGTGCGTTCGCAG CCGCATTATGTCGACATCGCTATCGATGGCGCCGGTAAGCAGCGCGTCTGGTACTGA
Upstream 100 bases:
>100_bases ATGTCATTTAACTGTGTTATATAGGGCAGTAAATTCACACGCTGACCGGGTAATTTGTCCGGTGTGCGCTCTTGCATTGT GATGCCTGAGGGTCTGTCCC
Downstream 100 bases:
>100_bases CCGATGGCCGGTTCTTTCGTCGATATCGCCCAAACCTGCGCACCGATGGTGAAGGTGGAGACGCTTGCAGGCATTGTAAG CCTCGAGAGCCGGTTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKNLLLNILLATCCTMSPYLISGDKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWRELAEGHPFPTCSGVGFQSSR PGYEPYYCDDGYKLTNDVGPGGRQATCVSISPQPVSNSLCWNGDDYTSRGNSVLLPHWQPVEGRRQCLGYTMVRPNVRSQ PHYVDIAIDGAGKQRVWY
Sequences:
>Translated_178_residues MKNLLLNILLATCCTMSPYLISGDKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWRELAEGHPFPTCSGVGFQSSR PGYEPYYCDDGYKLTNDVGPGGRQATCVSISPQPVSNSLCWNGDDYTSRGNSVLLPHWQPVEGRRQCLGYTMVRPNVRSQ PHYVDIAIDGAGKQRVWY >Mature_178_residues MKNLLLNILLATCCTMSPYLISGDKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWRELAEGHPFPTCSGVGFQSSR PGYEPYYCDDGYKLTNDVGPGGRQATCVSISPQPVSNSLCWNGDDYTSRGNSVLLPHWQPVEGRRQCLGYTMVRPNVRSQ PHYVDIAIDGAGKQRVWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19746; Mature: 19746
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLLLNILLATCCTMSPYLISGDKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWR CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ELAEGHPFPTCSGVGFQSSRPGYEPYYCDDGYKLTNDVGPGGRQATCVSISPQPVSNSLC HHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCE WNGDDYTSRGNSVLLPHWQPVEGRRQCLGYTMVRPNVRSQPHYVDIAIDGAGKQRVWY ECCCCCCCCCCEEECCCCCCCCHHHHHHCEEEECCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKNLLLNILLATCCTMSPYLISGDKARAEDWGCQVILCLSNPGGPTQYAECRPPIQKLWR CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ELAEGHPFPTCSGVGFQSSRPGYEPYYCDDGYKLTNDVGPGGRQATCVSISPQPVSNSLC HHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCE WNGDDYTSRGNSVLLPHWQPVEGRRQCLGYTMVRPNVRSQPHYVDIAIDGAGKQRVWY ECCCCCCCCCCEEECCCCCCCCHHHHHHCEEEECCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA