| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895242
Identifier: 190895242
GI number: 190895242
Start: 1001813
End: 1003003
Strand: Reverse
Name: 190895242
Synonym: RHECIAT_PC0000915
Alternate gene names: NA
Gene position: 1003003-1001813 (Counterclockwise)
Preceding gene: 190895243
Following gene: 190895239
Centisome position: 91.89
GC content: 61.88
Gene sequence:
>1191_bases ATGAACACTCTCAGCACCAACACTCGGCCGACAGTTTCTGGCTTCAAAGTCGATATTTCCCGTGGCGAACGGATCGGCCG CGTTTCGTCGGAATGGTTTTCGCGCCCTGACGACGAACGGTTCATGTCCCTGACCGAGCTCTACGACACCGTCCGGTCCC GGGCGGACCGCGCTCATGCGCGAACGATCGAAAGTGCGGCGATCCGCGTCGAGGCCACCCGCGATAATGCCGAGCGGCTC GAGCTCCTCGTTCCCGGTGAGCGCCAGCCGATCGCCCCGACCCATTGGAGCTACGGTCAGCTCTGCAGCCTGGTTGGAGC TCCCGCCACCTACATGCGCCAGCTGCCGGCGCCGCTTGCCGCCATCAATCTTCAGCATGGTCTGCTCAATCACCGTGCCG AACTGGTGAAAACGCTCGAGATGGACGATGGCCGGTTCGAACTCAGGGCCGTCACCGGGCCGGAATACGGTCGCATCTGG GACCATGAACTGGTCTCGGCGGTGATGAAGATCGCCGGCAATGGCACCGGCGATACGATGTGGAAGGTGCCTGGCGTCCT CGATTGGGCGACGATGACGCACAACCCGTTCGTCGATATCACCAAGGACACGACGACGCTCTATGCCAGCGACCGCGACG TCTTCCTGTTCTTGGTCGACGACACCCATCCGATCGAAGCCGGACGGCTGCCAAATGGCGAACCGGACCTCTATTTCCGC GGCTTTTACGCTTGGAACTCGGAGGTCGGATCGAAGACGCTCGGTATCGCCTCCTTCTATCTCCGCGCCGTCTGCGCCAA TCGCAACCTCTGGGGCACGGAAAACTTCGCGGAAATCACCATCCGGCACTCGAAATTTGCCGAGCAGCGTTTTGCGCACG AGGCAGCGCCCGCGTTGGAAAGCTTTGCCAACTCCTCGCCGGCTCCGTTCGTGGCCGGAATCAGGGCTGCGCGCGAGCGG ATTGTCGCCGGCAAGGATGAGGATCGCGAGACCTTCCTGCGCCGGCGCGGCTTCTCAAAGGGCGAAACCAGCAAGGTGAT CGAGATGGTTTTGTCGGAAGAAGGCCGGCCGCCGGAGTCGATCTTTGACTTCGTACAGGGGATCACGGCGCTGGCACGCA CGAAGACCAACCAGGACACCCGCCTTGAGCTGGAGGGCAAGGCCAAGAAACTGCTTGAAAGTGCTGTCTGA
Upstream 100 bases:
>100_bases GCGCACCGGCGCCTCCATCGAGAATGATCCTTTTCCGCCCTTATACCCTCAACCCAGCCCGGCCAATGCGCCGGGCTCTT GCTTTTCAGGAGATAGTCCA
Downstream 100 bases:
>100_bases TCAAGCCTGAACGCGTCTCATCACGATGCCGTCGGCCCGTCCAAACCGGTCGACGGCATCGTCATTTTCAAAAGCCGCAA AAGGAACGCACGGGCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV
Sequences:
>Translated_396_residues MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV >Mature_396_residues MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44320; Mature: 44320
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHA CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTIESAAIRVEATRDNAERLELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLA HHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHH AINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIWDHELVSAVMKIAGNGTGDTM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE WKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR EECCCCEEHHHCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALE EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SFANSSPAPFVAGIRAARERIVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPES HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH IFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCC >Mature Secondary Structure MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHA CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RTIESAAIRVEATRDNAERLELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLA HHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHH AINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIWDHELVSAVMKIAGNGTGDTM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE WKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR EECCCCEEHHHCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALE EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SFANSSPAPFVAGIRAARERIVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPES HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH IFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA