Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190895242

Identifier: 190895242

GI number: 190895242

Start: 1001813

End: 1003003

Strand: Reverse

Name: 190895242

Synonym: RHECIAT_PC0000915

Alternate gene names: NA

Gene position: 1003003-1001813 (Counterclockwise)

Preceding gene: 190895243

Following gene: 190895239

Centisome position: 91.89

GC content: 61.88

Gene sequence:

>1191_bases
ATGAACACTCTCAGCACCAACACTCGGCCGACAGTTTCTGGCTTCAAAGTCGATATTTCCCGTGGCGAACGGATCGGCCG
CGTTTCGTCGGAATGGTTTTCGCGCCCTGACGACGAACGGTTCATGTCCCTGACCGAGCTCTACGACACCGTCCGGTCCC
GGGCGGACCGCGCTCATGCGCGAACGATCGAAAGTGCGGCGATCCGCGTCGAGGCCACCCGCGATAATGCCGAGCGGCTC
GAGCTCCTCGTTCCCGGTGAGCGCCAGCCGATCGCCCCGACCCATTGGAGCTACGGTCAGCTCTGCAGCCTGGTTGGAGC
TCCCGCCACCTACATGCGCCAGCTGCCGGCGCCGCTTGCCGCCATCAATCTTCAGCATGGTCTGCTCAATCACCGTGCCG
AACTGGTGAAAACGCTCGAGATGGACGATGGCCGGTTCGAACTCAGGGCCGTCACCGGGCCGGAATACGGTCGCATCTGG
GACCATGAACTGGTCTCGGCGGTGATGAAGATCGCCGGCAATGGCACCGGCGATACGATGTGGAAGGTGCCTGGCGTCCT
CGATTGGGCGACGATGACGCACAACCCGTTCGTCGATATCACCAAGGACACGACGACGCTCTATGCCAGCGACCGCGACG
TCTTCCTGTTCTTGGTCGACGACACCCATCCGATCGAAGCCGGACGGCTGCCAAATGGCGAACCGGACCTCTATTTCCGC
GGCTTTTACGCTTGGAACTCGGAGGTCGGATCGAAGACGCTCGGTATCGCCTCCTTCTATCTCCGCGCCGTCTGCGCCAA
TCGCAACCTCTGGGGCACGGAAAACTTCGCGGAAATCACCATCCGGCACTCGAAATTTGCCGAGCAGCGTTTTGCGCACG
AGGCAGCGCCCGCGTTGGAAAGCTTTGCCAACTCCTCGCCGGCTCCGTTCGTGGCCGGAATCAGGGCTGCGCGCGAGCGG
ATTGTCGCCGGCAAGGATGAGGATCGCGAGACCTTCCTGCGCCGGCGCGGCTTCTCAAAGGGCGAAACCAGCAAGGTGAT
CGAGATGGTTTTGTCGGAAGAAGGCCGGCCGCCGGAGTCGATCTTTGACTTCGTACAGGGGATCACGGCGCTGGCACGCA
CGAAGACCAACCAGGACACCCGCCTTGAGCTGGAGGGCAAGGCCAAGAAACTGCTTGAAAGTGCTGTCTGA

Upstream 100 bases:

>100_bases
GCGCACCGGCGCCTCCATCGAGAATGATCCTTTTCCGCCCTTATACCCTCAACCCAGCCCGGCCAATGCGCCGGGCTCTT
GCTTTTCAGGAGATAGTCCA

Downstream 100 bases:

>100_bases
TCAAGCCTGAACGCGTCTCATCACGATGCCGTCGGCCCGTCCAAACCGGTCGACGGCATCGTCATTTTCAAAAGCCGCAA
AAGGAACGCACGGGCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL
ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW
DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR
GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER
IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV

Sequences:

>Translated_396_residues
MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL
ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW
DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR
GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER
IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV
>Mature_396_residues
MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHARTIESAAIRVEATRDNAERL
ELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLAAINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIW
DHELVSAVMKIAGNGTGDTMWKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR
GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALESFANSSPAPFVAGIRAARER
IVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPESIFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44320; Mature: 44320

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHA
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RTIESAAIRVEATRDNAERLELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLA
HHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHH
AINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIWDHELVSAVMKIAGNGTGDTM
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
WKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR
EECCCCEEHHHCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALE
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
SFANSSPAPFVAGIRAARERIVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPES
HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH
IFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV
HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MNTLSTNTRPTVSGFKVDISRGERIGRVSSEWFSRPDDERFMSLTELYDTVRSRADRAHA
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RTIESAAIRVEATRDNAERLELLVPGERQPIAPTHWSYGQLCSLVGAPATYMRQLPAPLA
HHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCHH
AINLQHGLLNHRAELVKTLEMDDGRFELRAVTGPEYGRIWDHELVSAVMKIAGNGTGDTM
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCE
WKVPGVLDWATMTHNPFVDITKDTTTLYASDRDVFLFLVDDTHPIEAGRLPNGEPDLYFR
EECCCCEEHHHCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
GFYAWNSEVGSKTLGIASFYLRAVCANRNLWGTENFAEITIRHSKFAEQRFAHEAAPALE
EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
SFANSSPAPFVAGIRAARERIVAGKDEDRETFLRRRGFSKGETSKVIEMVLSEEGRPPES
HHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHH
IFDFVQGITALARTKTNQDTRLELEGKAKKLLESAV
HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA