| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894859
Identifier: 190894859
GI number: 190894859
Start: 572086
End: 572505
Strand: Reverse
Name: 190894859
Synonym: RHECIAT_PC0000524
Alternate gene names: NA
Gene position: 572505-572086 (Counterclockwise)
Preceding gene: 190894860
Following gene: 190894857
Centisome position: 52.45
GC content: 60.95
Gene sequence:
>420_bases ATGCAGCATCTCGACCACGCCATGCAGATCGCTATGGACGCACATGGCGGCCAGACGGACAAAACCGGCCAGCCGTTCTT CGAGCACTGTCAGCGGGTCGCGCTTCTCGTGTCGGGCGATGAGGCGCGAACCGTCGCCTACCTTCACGACGTTGCAGAAA AAGGCAGCGGCTGGACGCTCGACAGGCTGAGAGAGGAAGGCTTCCCGCCGGCGATCATCTCGGCGGTGGACGCGTTGACC CAGCGGCCCGACGAGCCGGACGAGGAATTCGTCAGGCGTGCGGCAACAAATCCGCTCGCTCTGCCTGTCAAGCGGGCCGA CCTTGAAGACAATCTCCGACAGGCCGAACAGATCGGCAAAAACAAGGAAAAGTATCAACGCGGCCTGGATCTGCTACGCG ATATAGAGAACGGACAATAG
Upstream 100 bases:
>100_bases GTGGTCAAGGTGCCGGGGCGGCTGCGCCCGATATCGAAATAACCACGGGGGAGAAGCCTTCGCGGCAGAAGATCAGAGAG ACCGAAGGACCGTAATCGTC
Downstream 100 bases:
>100_bases GTGTTCCGTTCTGCGGCCACAGCCAAGGTCCTGCCGGCAAGAGTCGTTCGCGGCGCTATTTCTGACGCGGCTGCCGCAAG CCGGCGCCGGCAGCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: GTP Pyrophosphokinase; Metal Dependent Phosphohydrolase HD Region; Metal-Dependent Phosphohydrolase Hd Sub Domain; Guanosine Polyphosphate Pyrophosphohydrolases/Synthetases; Phage Protein; Guanosine-3 5-Bis(Diphosphate) 3-Diphosphatase; Metal Dependent Phosphohydrolase Hd Region
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MQHLDHAMQIAMDAHGGQTDKTGQPFFEHCQRVALLVSGDEARTVAYLHDVAEKGSGWTLDRLREEGFPPAIISAVDALT QRPDEPDEEFVRRAATNPLALPVKRADLEDNLRQAEQIGKNKEKYQRGLDLLRDIENGQ
Sequences:
>Translated_139_residues MQHLDHAMQIAMDAHGGQTDKTGQPFFEHCQRVALLVSGDEARTVAYLHDVAEKGSGWTLDRLREEGFPPAIISAVDALT QRPDEPDEEFVRRAATNPLALPVKRADLEDNLRQAEQIGKNKEKYQRGLDLLRDIENGQ >Mature_139_residues MQHLDHAMQIAMDAHGGQTDKTGQPFFEHCQRVALLVSGDEARTVAYLHDVAEKGSGWTLDRLREEGFPPAIISAVDALT QRPDEPDEEFVRRAATNPLALPVKRADLEDNLRQAEQIGKNKEKYQRGLDLLRDIENGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15601; Mature: 15601
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLDHAMQIAMDAHGGQTDKTGQPFFEHCQRVALLVSGDEARTVAYLHDVAEKGSGWTL CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH DRLREEGFPPAIISAVDALTQRPDEPDEEFVRRAATNPLALPVKRADLEDNLRQAEQIGK HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHCC NKEKYQRGLDLLRDIENGQ CHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQHLDHAMQIAMDAHGGQTDKTGQPFFEHCQRVALLVSGDEARTVAYLHDVAEKGSGWTL CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH DRLREEGFPPAIISAVDALTQRPDEPDEEFVRRAATNPLALPVKRADLEDNLRQAEQIGK HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHCC NKEKYQRGLDLLRDIENGQ CHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA