| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894860
Identifier: 190894860
GI number: 190894860
Start: 572511
End: 572837
Strand: Reverse
Name: 190894860
Synonym: RHECIAT_PC0000525
Alternate gene names: NA
Gene position: 572837-572511 (Counterclockwise)
Preceding gene: 190894861
Following gene: 190894859
Centisome position: 52.48
GC content: 64.22
Gene sequence:
>327_bases ATGGCCACAGACAAACACGAACAGATACGCCGGCGGGCCTACGAAATCTGGGAGGCCGAAGGCCGCCCTGAAGGGGCGGA CCTGCGCCATTGGATGCAAGCCTGCGACGAGCTGGCTGGCGAGGACGAGCATGAGACGCTGCAGGACCTGCTCGATCAAG ACGACAGGGACGACGCGGCGCTGCTTCAAGGCGCAGGGGAAAGCGGCGATCTCGACCGGCCACGCATCGCAGGTGGTCAA GGTGCCGGGGCGGCTGCGCCCGATATCGAAATAACCACGGGGGAGAAGCCTTCGCGGCAGAAGATCAGAGAGACCGAAGG ACCGTAA
Upstream 100 bases:
>100_bases GGCGTGTGTCGATGCCTGCCGGAGCTGCGCTGAAAGCTGCCGGCAGATGGCGGCCTAGTTTTCGGCATCTTGCGAGGTCA GGTCGGAACTGGAGAAGATC
Downstream 100 bases:
>100_bases TCGTCATGCAGCATCTCGACCACGCCATGCAGATCGCTATGGACGCACATGGCGGCCAGACGGACAAAACCGGCCAGCCG TTCTTCGAGCACTGTCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MATDKHEQIRRRAYEIWEAEGRPEGADLRHWMQACDELAGEDEHETLQDLLDQDDRDDAALLQGAGESGDLDRPRIAGGQ GAGAAAPDIEITTGEKPSRQKIRETEGP
Sequences:
>Translated_108_residues MATDKHEQIRRRAYEIWEAEGRPEGADLRHWMQACDELAGEDEHETLQDLLDQDDRDDAALLQGAGESGDLDRPRIAGGQ GAGAAAPDIEITTGEKPSRQKIRETEGP >Mature_107_residues ATDKHEQIRRRAYEIWEAEGRPEGADLRHWMQACDELAGEDEHETLQDLLDQDDRDDAALLQGAGESGDLDRPRIAGGQG AGAAAPDIEITTGEKPSRQKIRETEGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11907; Mature: 11776
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDKHEQIRRRAYEIWEAEGRPEGADLRHWMQACDELAGEDEHETLQDLLDQDDRDDAA CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHH LLQGAGESGDLDRPRIAGGQGAGAAAPDIEITTGEKPSRQKIRETEGP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCC >Mature Secondary Structure ATDKHEQIRRRAYEIWEAEGRPEGADLRHWMQACDELAGEDEHETLQDLLDQDDRDDAA CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHH LLQGAGESGDLDRPRIAGGQGAGAAAPDIEITTGEKPSRQKIRETEGP HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA