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The map label for this gene is glpD [H]

Identifier: 190894669

GI number: 190894669

Start: 357723

End: 359237

Strand: Reverse

Name: glpD [H]

Synonym: RHECIAT_PC0000332

Alternate gene names: 190894669

Gene position: 359237-357723 (Counterclockwise)

Preceding gene: 190894670

Following gene: 190894668

Centisome position: 32.91

GC content: 63.04

Gene sequence:

>1515_bases
TTGGGCCGGGAGATATACGATATTTTCGTCATTGGCGGCGGCATCAACGGCTGCGGCATCGCGCGTGATGCCGTCGGGCG
CGGCTATTCCGTCGCGCTGGCGGAGATGAACGATTTCGCCTCCGGCACCTCATCCGGCGCCACCAAGCTGATTCATGGCG
GCCTGCGTTATCTCGAGCATTACGAGTTCCGCCTGGTGCGTGAATCGTTGATGGAGCGCGAGATCCTCTGGGCGATGGCG
CCGCACATCATCTGGCCGCTGCGTTTCGTGTTGCCTTATCATAAGGGCGGCATTCGCCCCGCCTGGCTGATCCGGCTCGG
CCTCTTCCTCTACGACCATCTCGGCGGCCGCAAGCTGCTGCCGGCGACCTCGGTGCTCGACATGCGCAAGGACCCGGCCG
GCAAGCCGCTGAAGGCGCTATTTACGAGAGCGTTCGAATATTCCGACGGCTGGGTCGATGACGCCCGCATGGTGGTGCTG
AACGCCCGTGATGCCGCCGACAAGGGTGCGGCCATCATGCCGCGCACCAAAGTGGTCTCGGCAAGGCGCGAGAACGGCCT
GTGGCATATCGAGACCGTCGATGCCGTCACCGGCCGCAATGACAGTCATCAGGCCCGTATGCTGGTCAATGCCGCCGGCC
CCTGGGTCGATCATGTCATTCGTTCCGCCTTCGGCCAGAACGAGGCCCACCATGTCCGCCTCGTCCAGGGCAGCCATATT
ATCGTGAAGAAGAAGTTCGACGATCCGCGCGCCTATTTCTTCCAGAATCCGGACAATCGCATCATCTTCGCCATTCCCTA
TGAGGGCGACTTCACCCTGATCGGCACGACCGACCGCGATTACACCGCCGATCCGAGGGATGTCCGGATCTCCGAGGAGG
AGACGGTCTATCTCTGCAATGCGGCGTCCGAATATTTCAAGGAGCCGGTGCGGCCGGAAGATATCGTCTGGACCTATTCG
GCGGTCCGCCCGCTTTATGACGACGGTGCCTCGAAGGCGCAGGAGGCGACGCGCGACTATGTGCTGAAGCTGGAAGGCGA
GGGGCAGACCGCGCCGCTGCTCAATGTTTTCGGTGGCAAGCTCACCACCTATCGCCGCCTGTCCGAGCACGCGCTGGAGA
AGATCGGTGCTGCGATCGGCGTCAAGGGTGCTCCCTGGACGGCCAAGAGCCATCTGCCCGGCGGCGATTTCCCGGTCCGC
GGTTATGAGGGGCAGGTCGCTGCGCTGAAGCGGCGCTATCCGTTCCTCGCCGATCAGCACGCTCGCCGGCTGATCCGTCG
CTACGGCACCAGGGCCGAGACGCTGCTCGGCAATGCCCGCGGCATTAACGATCTTGGACGGTTGTTCGGCGGCGATCTCT
ACGAGGCCGAGGTCGCCTATCTGGTCGAACATGAATGGGCCCGGCACGCCGAAGACGTGCTGTGGAGGAGAACAAAGGAT
GGTCTGCGCCTTTCGAAGGAGCAGGCTCAGTCACTGGAGGAGTACATGGCTGCCATGCCGGCGATGGCCGGATAG

Upstream 100 bases:

>100_bases
TTCGTTTGACATTCGTATTTCTTTCGTTTTAACTGATGTCACTTTCGCAATCGCGCAAATTTTGTGCGATGCGAAATCAG
CAGCAGGCTCGGAGGGGCAA

Downstream 100 bases:

>100_bases
GCGGCGTGTGATCCCCGCTGCGTGGAGGCACGGGAACGGGAATGCTGGAACTGCGAAACGCCGCCAAGATGGTGGGCGCG
GACTATCACATCTATCCGAC

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MGREIYDIFVIGGGINGCGIARDAVGRGYSVALAEMNDFASGTSSGATKLIHGGLRYLEHYEFRLVRESLMEREILWAMA
PHIIWPLRFVLPYHKGGIRPAWLIRLGLFLYDHLGGRKLLPATSVLDMRKDPAGKPLKALFTRAFEYSDGWVDDARMVVL
NARDAADKGAAIMPRTKVVSARRENGLWHIETVDAVTGRNDSHQARMLVNAAGPWVDHVIRSAFGQNEAHHVRLVQGSHI
IVKKKFDDPRAYFFQNPDNRIIFAIPYEGDFTLIGTTDRDYTADPRDVRISEEETVYLCNAASEYFKEPVRPEDIVWTYS
AVRPLYDDGASKAQEATRDYVLKLEGEGQTAPLLNVFGGKLTTYRRLSEHALEKIGAAIGVKGAPWTAKSHLPGGDFPVR
GYEGQVAALKRRYPFLADQHARRLIRRYGTRAETLLGNARGINDLGRLFGGDLYEAEVAYLVEHEWARHAEDVLWRRTKD
GLRLSKEQAQSLEEYMAAMPAMAG

Sequences:

>Translated_504_residues
MGREIYDIFVIGGGINGCGIARDAVGRGYSVALAEMNDFASGTSSGATKLIHGGLRYLEHYEFRLVRESLMEREILWAMA
PHIIWPLRFVLPYHKGGIRPAWLIRLGLFLYDHLGGRKLLPATSVLDMRKDPAGKPLKALFTRAFEYSDGWVDDARMVVL
NARDAADKGAAIMPRTKVVSARRENGLWHIETVDAVTGRNDSHQARMLVNAAGPWVDHVIRSAFGQNEAHHVRLVQGSHI
IVKKKFDDPRAYFFQNPDNRIIFAIPYEGDFTLIGTTDRDYTADPRDVRISEEETVYLCNAASEYFKEPVRPEDIVWTYS
AVRPLYDDGASKAQEATRDYVLKLEGEGQTAPLLNVFGGKLTTYRRLSEHALEKIGAAIGVKGAPWTAKSHLPGGDFPVR
GYEGQVAALKRRYPFLADQHARRLIRRYGTRAETLLGNARGINDLGRLFGGDLYEAEVAYLVEHEWARHAEDVLWRRTKD
GLRLSKEQAQSLEEYMAAMPAMAG
>Mature_503_residues
GREIYDIFVIGGGINGCGIARDAVGRGYSVALAEMNDFASGTSSGATKLIHGGLRYLEHYEFRLVRESLMEREILWAMAP
HIIWPLRFVLPYHKGGIRPAWLIRLGLFLYDHLGGRKLLPATSVLDMRKDPAGKPLKALFTRAFEYSDGWVDDARMVVLN
ARDAADKGAAIMPRTKVVSARRENGLWHIETVDAVTGRNDSHQARMLVNAAGPWVDHVIRSAFGQNEAHHVRLVQGSHII
VKKKFDDPRAYFFQNPDNRIIFAIPYEGDFTLIGTTDRDYTADPRDVRISEEETVYLCNAASEYFKEPVRPEDIVWTYSA
VRPLYDDGASKAQEATRDYVLKLEGEGQTAPLLNVFGGKLTTYRRLSEHALEKIGAAIGVKGAPWTAKSHLPGGDFPVRG
YEGQVAALKRRYPFLADQHARRLIRRYGTRAETLLGNARGINDLGRLFGGDLYEAEVAYLVEHEWARHAEDVLWRRTKDG
LRLSKEQAQSLEEYMAAMPAMAG

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses molecular oxygen or nitrate as electron acceptor [H]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=531, Percent_Identity=32.5800376647834, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI285002231, Length=531, Percent_Identity=32.5800376647834, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI2367226, Length=469, Percent_Identity=51.1727078891258, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1788574, Length=483, Percent_Identity=27.1221532091097, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115534726, Length=525, Percent_Identity=27.8095238095238, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17509253, Length=510, Percent_Identity=29.4117647058824, Blast_Score=140, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6322036, Length=549, Percent_Identity=26.5938069216758, Blast_Score=147, Evalue=4e-36,
Organism=Drosophila melanogaster, GI161077125, Length=536, Percent_Identity=29.2910447761194, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24653942, Length=536, Percent_Identity=29.2910447761194, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24653944, Length=536, Percent_Identity=29.2910447761194, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI20130025, Length=536, Percent_Identity=29.2910447761194, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24586295, Length=395, Percent_Identity=31.8987341772152, Blast_Score=138, Evalue=1e-32,
Organism=Drosophila melanogaster, GI19921278, Length=494, Percent_Identity=23.6842105263158, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 56557; Mature: 56426

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGREIYDIFVIGGGINGCGIARDAVGRGYSVALAEMNDFASGTSSGATKLIHGGLRYLEH
CCCEEEEEEEECCCCCCCCCCHHHCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHH
YEFRLVRESLMEREILWAMAPHIIWPLRFVLPYHKGGIRPAWLIRLGLFLYDHLGGRKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
PATSVLDMRKDPAGKPLKALFTRAFEYSDGWVDDARMVVLNARDAADKGAAIMPRTKVVS
CHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHH
ARRENGLWHIETVDAVTGRNDSHQARMLVNAAGPWVDHVIRSAFGQNEAHHVRLVQGSHI
HHHHCCCEEEEEEHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCEE
IVKKKFDDPRAYFFQNPDNRIIFAIPYEGDFTLIGTTDRDYTADPRDVRISEEETVYLCN
EEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEC
AASEYFKEPVRPEDIVWTYSAVRPLYDDGASKAQEATRDYVLKLEGEGQTAPLLNVFGGK
CHHHHHHCCCCCCCEEEEHHHHCCHHCCCHHHHHHHCCCEEEEECCCCCCCCHHHHCCCC
LTTYRRLSEHALEKIGAAIGVKGAPWTAKSHLPGGDFPVRGYEGQVAALKRRYPFLADQH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHH
ARRLIRRYGTRAETLLGNARGINDLGRLFGGDLYEAEVAYLVEHEWARHAEDVLWRRTKD
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLRLSKEQAQSLEEYMAAMPAMAG
CCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GREIYDIFVIGGGINGCGIARDAVGRGYSVALAEMNDFASGTSSGATKLIHGGLRYLEH
CCEEEEEEEECCCCCCCCCCHHHCCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHH
YEFRLVRESLMEREILWAMAPHIIWPLRFVLPYHKGGIRPAWLIRLGLFLYDHLGGRKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
PATSVLDMRKDPAGKPLKALFTRAFEYSDGWVDDARMVVLNARDAADKGAAIMPRTKVVS
CHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEECCHHHHHH
ARRENGLWHIETVDAVTGRNDSHQARMLVNAAGPWVDHVIRSAFGQNEAHHVRLVQGSHI
HHHHCCCEEEEEEHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCEE
IVKKKFDDPRAYFFQNPDNRIIFAIPYEGDFTLIGTTDRDYTADPRDVRISEEETVYLCN
EEEECCCCCCEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCEEEEEC
AASEYFKEPVRPEDIVWTYSAVRPLYDDGASKAQEATRDYVLKLEGEGQTAPLLNVFGGK
CHHHHHHCCCCCCCEEEEHHHHCCHHCCCHHHHHHHCCCEEEEECCCCCCCCHHHHCCCC
LTTYRRLSEHALEKIGAAIGVKGAPWTAKSHLPGGDFPVRGYEGQVAALKRRYPFLADQH
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHH
ARRLIRRYGTRAETLLGNARGINDLGRLFGGDLYEAEVAYLVEHEWARHAEDVLWRRTKD
HHHHHHHHCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GLRLSKEQAQSLEEYMAAMPAMAG
CCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987111; 9278503; 3045087; 3045764 [H]