| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is folC [H]
Identifier: 189424301
GI number: 189424301
Start: 1283464
End: 1284750
Strand: Reverse
Name: folC [H]
Synonym: Glov_1236
Alternate gene names: 189424301
Gene position: 1284750-1283464 (Counterclockwise)
Preceding gene: 189424302
Following gene: 189424300
Centisome position: 32.79
GC content: 62.63
Gene sequence:
>1287_bases GTGCCCGCTTCACAGCAGCTTTCCCGGCTTTTTGGCCGGCGACGTTTCAACATCAAGCCGGGACTTGAACGGATCACGGC CCTGCTGGAGCGCCACGGTCACCCGGAACGTTCCTTTGCCGCCATCCATGTTGTCGGCACCAACGGCAAAGGCTCTACCG CCGCATTTCTAGCTGCCATCATTGAACAGGCCGGTTACTGCACCGGCCTGTTTACCTCTCCCCACCTTGTCAGCTACACG GAACGATTTCGGGTCAACGGGGTTGATTGCCCACCAGAGCAACTTGAGGCGCTTATCCCGGACCTGCTTGAACAGGCCGG CCCGGATGACACGTTCTTTGAGCTGACCACCGCCCTGGCCTGCCACTGGTTTGCCAGGAACAAGGTTCAGCTGGCCGTGC TGGAAGCCGGCATGGGGGGACGCAGTGACGCCACTGCCGCAGTAGCGGGCATAGCCACCATCATCAGCCCGATTGCCCTT GACCATTGTCAGTGGCTGGGTAATGACCTCCAGTCCATTGCAGCTGAGAAAGTCGCCATTGCCAGACCGGGCAGTCCGGT TATCTCTGCAGTACAACCGCCGGACGTGCAGGCGGTGATTGAGGAGTACTGCCGGACAAACAACAACCGGCTCCTGCTGG CCGGCCGGGACTTCAACGCAACCAGCAACGGAGCTGACACCGGCCTGACCTTCACCGGCAGCTCCGGCAGCCTGAGCGGT CTGCACCCCAGCTTGAGCGGCAGCTATCAGACCGGTAACGCCGCTCTTGCACTGGCCGCGGCAGAACAACTGGCGACGCT CGGTTTTCCCATTTCCCAGCAGGCCATGCAGGCAGGTCTGGCCACAGCACGCTGGCCGGGCCGCCTTGAACGGCTCAGAC TGGCAGATGGTTCCGAACTGCTGCTGGATGGCGCCCACAACCCGGCAGGTGCGCAGGCATTGGCAGCGGCGCTGCAGGAG CTTGGTAAACGCAGGATCATCCTGTTACTGGGGATGATGGAAGACAAAGACCTGCAAGGCGTATTGCAACCGTTGCTGCA ACGGGTTCAGCAGGTTATAACGGTCAGCCCCGCGCAGGAACGCGCTCTTCCGGCCACCGAACTGGCTGCCAGGTGCAGGA CGGCAGGGACTCCGGCCACAGCCGCAGACTCGGTTGCAGCCGGCCTGGAGGCAGCGCGGGCAGCAGCCGGACCCGGTGAC TTGATCGTAGCTGCCGGCTCACTCTTTCTGGTGGGTGAACTCAAGGCGCTGCTGGCCGGTGTTCCCTGTGAAGCGGTGCG GGGGTAA
Upstream 100 bases:
>100_bases AGTACCTGCTTGACCACGGCATGGTTGACATGATTGTCTCACGGCTTGAGATGCGCAGCACCCTGGGCCAGATTCTGGCC ATGCTCACCAAGCAGTAGGC
Downstream 100 bases:
>100_bases TGCGTCTCCCTGTAAACGTAAGACGTGCATGTTGTAAGGATCCTATCTTGAAACTACGTACCTGCATTTTTCTACTATTC CTGCTGATGCCGGCCCTGCT
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPASQQLSRLFGRRRFNIKPGLERITALLERHGHPERSFAAIHVVGTNGKGSTAAFLAAIIEQAGYCTGLFTSPHLVSYT ERFRVNGVDCPPEQLEALIPDLLEQAGPDDTFFELTTALACHWFARNKVQLAVLEAGMGGRSDATAAVAGIATIISPIAL DHCQWLGNDLQSIAAEKVAIARPGSPVISAVQPPDVQAVIEEYCRTNNNRLLLAGRDFNATSNGADTGLTFTGSSGSLSG LHPSLSGSYQTGNAALALAAAEQLATLGFPISQQAMQAGLATARWPGRLERLRLADGSELLLDGAHNPAGAQALAAALQE LGKRRIILLLGMMEDKDLQGVLQPLLQRVQQVITVSPAQERALPATELAARCRTAGTPATAADSVAAGLEAARAAAGPGD LIVAAGSLFLVGELKALLAGVPCEAVRG
Sequences:
>Translated_428_residues MPASQQLSRLFGRRRFNIKPGLERITALLERHGHPERSFAAIHVVGTNGKGSTAAFLAAIIEQAGYCTGLFTSPHLVSYT ERFRVNGVDCPPEQLEALIPDLLEQAGPDDTFFELTTALACHWFARNKVQLAVLEAGMGGRSDATAAVAGIATIISPIAL DHCQWLGNDLQSIAAEKVAIARPGSPVISAVQPPDVQAVIEEYCRTNNNRLLLAGRDFNATSNGADTGLTFTGSSGSLSG LHPSLSGSYQTGNAALALAAAEQLATLGFPISQQAMQAGLATARWPGRLERLRLADGSELLLDGAHNPAGAQALAAALQE LGKRRIILLLGMMEDKDLQGVLQPLLQRVQQVITVSPAQERALPATELAARCRTAGTPATAADSVAAGLEAARAAAGPGD LIVAAGSLFLVGELKALLAGVPCEAVRG >Mature_427_residues PASQQLSRLFGRRRFNIKPGLERITALLERHGHPERSFAAIHVVGTNGKGSTAAFLAAIIEQAGYCTGLFTSPHLVSYTE RFRVNGVDCPPEQLEALIPDLLEQAGPDDTFFELTTALACHWFARNKVQLAVLEAGMGGRSDATAAVAGIATIISPIALD HCQWLGNDLQSIAAEKVAIARPGSPVISAVQPPDVQAVIEEYCRTNNNRLLLAGRDFNATSNGADTGLTFTGSSGSLSGL HPSLSGSYQTGNAALALAAAEQLATLGFPISQQAMQAGLATARWPGRLERLRLADGSELLLDGAHNPAGAQALAAALQEL GKRRIILLLGMMEDKDLQGVLQPLLQRVQQVITVSPAQERALPATELAARCRTAGTPATAADSVAAGLEAARAAAGPGDL IVAAGSLFLVGELKALLAGVPCEAVRG
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=352, Percent_Identity=31.5340909090909, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI66932984, Length=352, Percent_Identity=31.5340909090909, Blast_Score=121, Evalue=1e-27, Organism=Escherichia coli, GI1788654, Length=419, Percent_Identity=31.5035799522673, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71984923, Length=335, Percent_Identity=29.8507462686567, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17553148, Length=335, Percent_Identity=29.8507462686567, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17553150, Length=335, Percent_Identity=29.8507462686567, Blast_Score=108, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323760, Length=424, Percent_Identity=31.6037735849057, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6324815, Length=371, Percent_Identity=25.0673854447439, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6322718, Length=359, Percent_Identity=25.0696378830084, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641571, Length=291, Percent_Identity=31.6151202749141, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24581568, Length=231, Percent_Identity=28.1385281385281, Blast_Score=88, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 44663; Mature: 44532
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASQQLSRLFGRRRFNIKPGLERITALLERHGHPERSFAAIHVVGTNGKGSTAAFLAAI CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHH IEQAGYCTGLFTSPHLVSYTERFRVNGVDCPPEQLEALIPDLLEQAGPDDTFFELTTALA HHHCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH CHWFARNKVQLAVLEAGMGGRSDATAAVAGIATIISPIALDHCQWLGNDLQSIAAEKVAI HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ARPGSPVISAVQPPDVQAVIEEYCRTNNNRLLLAGRDFNATSNGADTGLTFTGSSGSLSG ECCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCC LHPSLSGSYQTGNAALALAAAEQLATLGFPISQQAMQAGLATARWPGRLERLRLADGSEL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCHHHHEECCCCCEE LLDGAHNPAGAQALAAALQELGKRRIILLLGMMEDKDLQGVLQPLLQRVQQVITVSPAQE EEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHH RALPATELAARCRTAGTPATAADSVAAGLEAARAAAGPGDLIVAAGSLFLVGELKALLAG HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHC VPCEAVRG CCHHHCCC >Mature Secondary Structure PASQQLSRLFGRRRFNIKPGLERITALLERHGHPERSFAAIHVVGTNGKGSTAAFLAAI CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHH IEQAGYCTGLFTSPHLVSYTERFRVNGVDCPPEQLEALIPDLLEQAGPDDTFFELTTALA HHHCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH CHWFARNKVQLAVLEAGMGGRSDATAAVAGIATIISPIALDHCQWLGNDLQSIAAEKVAI HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE ARPGSPVISAVQPPDVQAVIEEYCRTNNNRLLLAGRDFNATSNGADTGLTFTGSSGSLSG ECCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCC LHPSLSGSYQTGNAALALAAAEQLATLGFPISQQAMQAGLATARWPGRLERLRLADGSEL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCHHHHEECCCCCEE LLDGAHNPAGAQALAAALQELGKRRIILLLGMMEDKDLQGVLQPLLQRVQQVITVSPAQE EEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHH RALPATELAARCRTAGTPATAADSVAAGLEAARAAAGPGDLIVAAGSLFLVGELKALLAG HCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHC VPCEAVRG CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]