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The map label for this gene is ttuB [H]

Identifier: 189352306

GI number: 189352306

Start: 354875

End: 356203

Strand: Reverse

Name: ttuB [H]

Synonym: BMULJ_03525

Alternate gene names: 189352306

Gene position: 356203-354875 (Counterclockwise)

Preceding gene: 189352307

Following gene: 189352305

Centisome position: 14.4

GC content: 67.64

Gene sequence:

>1329_bases
ATGAAATCCCGATACAGTGCGCCGCCGCTCGCCGGCGACGCGATTCCGCTCACCGATCCGCCGACCTTCGAGGCGCGCAC
GTATGCGAAAGTCAGCCGCCGGCTGATTCCGTTCCTGATGCTCTGCTATCTCGGCGCGTACCTCGATCGCGTCAACGTCG
GCTTCGCGAAGCTGCAGATGCTCAACGATCTGCGCTTCAGCGAAACCGTGTACGGGATGGGCGCCGGCATCTTCTTTCTC
GGCTACTTCCTGTTCGAGGTGCCGAGCAATCTGATCCTGCATCGCGTCGGCGCGCGGCGGTGGCTCGCGCGGATCATGCT
CACGTGGGCCGTCATTTCCGCGAGCTTCGTGTTCGTGAAGTCGCCCGCCGCGTTCTACGTGCTGCGGTTTCTGCTCGGCG
TCGCCGAAGCCGGCTTCGCGCCCGGCGTGATCCTTTACCTGACCTACTGGTATCCGTCCGCGCGTCGCGCGAAGGCGTTG
TCGCTGTTCTTCATGGCGATTCCGCTCGCGGGCATCGTCGGCGGGCCGCTGTCCGGCGCGATCATGCACACGCTGCACGG
TGCGATGTCGATGGCCGGCTGGAAATGGCTGTTCCTGCTCGAAGCCTTGCCGTCGCTCGTGCTCGGCGTCGCGATCCTCC
GCTATCTCGACGACGGCATCGCGCACGCCAAGTGGCTCTCCGATCCGGAGAAGGCGCTGCTCGCGCGCAACGTCGCCGGC
GACGAGGCGCACAAGACGGCGCATCTGTCGATCCGCGCGTTCGTCGGCGATCGCCGGCTCTGGCTGATGGCCGCGATCTA
CTTCTGCGTCGTGCTCGGCCAGTACGGACTCACGTTCTGGCTGCCGACGATCATCCGCAAGGCGGGCGTGTCGGACCCGC
TCTGGGTCGGCGTCTTCACCGCGATTCCGTATCTCTGCGCGATCGTCGCGCTGCCGCTGATCGGCATGAGCGCCGACCGC
CGCCGCGAACGTCGGCTGCACCTCGCGGTGCCGATGCTCGTCGCCGCCGCCGGCTTTGCCGCGCTGCCCGCACTCGGCAG
CGTCACCGCGTCGATCGTCTGCCTGAGCATCGCGGCGGCCGGGATTCTCGCGTCGTCGTCGCAGTTCTGGTCGCTGCCGA
CCGCGCTGCTCGGCGGCGTATCGGCCGCCGCGGGCATCGCCGCCGTGAACTGCTTCGCGAATCTCGCGGGCTTCTTCTCA
CCGGCGATCGTCGGCTGGCTCAACGATCTGACCGGCAAGTCGACCGCCGGGCTGATCTTCATCTCGGCCGCGGTCACGCT
GGGCGCCGCGCTCGTATTCGCCGTGCCGGCCCGGTCCGTGAACCGCTGA

Upstream 100 bases:

>100_bases
CGCTCGACGTAAACGGCGGCATGCTGATTCACTGAGCGCGTCCGACGACCGTTCCCAAAACGCCCGGACACGACCGGGCG
ACATGGCAGGAGACACGACG

Downstream 100 bases:

>100_bases
CGCGCCGGCACACTTTCGACCTCACAGGAGCAACAGATGGATAGCGAAGTCATGACCGAAGACGTCGCGCTCGCCGAGCG
CGCGTACCGGATCAGGAGAA

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MKSRYSAPPLAGDAIPLTDPPTFEARTYAKVSRRLIPFLMLCYLGAYLDRVNVGFAKLQMLNDLRFSETVYGMGAGIFFL
GYFLFEVPSNLILHRVGARRWLARIMLTWAVISASFVFVKSPAAFYVLRFLLGVAEAGFAPGVILYLTYWYPSARRAKAL
SLFFMAIPLAGIVGGPLSGAIMHTLHGAMSMAGWKWLFLLEALPSLVLGVAILRYLDDGIAHAKWLSDPEKALLARNVAG
DEAHKTAHLSIRAFVGDRRLWLMAAIYFCVVLGQYGLTFWLPTIIRKAGVSDPLWVGVFTAIPYLCAIVALPLIGMSADR
RRERRLHLAVPMLVAAAGFAALPALGSVTASIVCLSIAAAGILASSSQFWSLPTALLGGVSAAAGIAAVNCFANLAGFFS
PAIVGWLNDLTGKSTAGLIFISAAVTLGAALVFAVPARSVNR

Sequences:

>Translated_442_residues
MKSRYSAPPLAGDAIPLTDPPTFEARTYAKVSRRLIPFLMLCYLGAYLDRVNVGFAKLQMLNDLRFSETVYGMGAGIFFL
GYFLFEVPSNLILHRVGARRWLARIMLTWAVISASFVFVKSPAAFYVLRFLLGVAEAGFAPGVILYLTYWYPSARRAKAL
SLFFMAIPLAGIVGGPLSGAIMHTLHGAMSMAGWKWLFLLEALPSLVLGVAILRYLDDGIAHAKWLSDPEKALLARNVAG
DEAHKTAHLSIRAFVGDRRLWLMAAIYFCVVLGQYGLTFWLPTIIRKAGVSDPLWVGVFTAIPYLCAIVALPLIGMSADR
RRERRLHLAVPMLVAAAGFAALPALGSVTASIVCLSIAAAGILASSSQFWSLPTALLGGVSAAAGIAAVNCFANLAGFFS
PAIVGWLNDLTGKSTAGLIFISAAVTLGAALVFAVPARSVNR
>Mature_442_residues
MKSRYSAPPLAGDAIPLTDPPTFEARTYAKVSRRLIPFLMLCYLGAYLDRVNVGFAKLQMLNDLRFSETVYGMGAGIFFL
GYFLFEVPSNLILHRVGARRWLARIMLTWAVISASFVFVKSPAAFYVLRFLLGVAEAGFAPGVILYLTYWYPSARRAKAL
SLFFMAIPLAGIVGGPLSGAIMHTLHGAMSMAGWKWLFLLEALPSLVLGVAILRYLDDGIAHAKWLSDPEKALLARNVAG
DEAHKTAHLSIRAFVGDRRLWLMAAIYFCVVLGQYGLTFWLPTIIRKAGVSDPLWVGVFTAIPYLCAIVALPLIGMSADR
RRERRLHLAVPMLVAAAGFAALPALGSVTASIVCLSIAAAGILASSSQFWSLPTALLGGVSAAAGIAAVNCFANLAGFFS
PAIVGWLNDLTGKSTAGLIFISAAVTLGAALVFAVPARSVNR

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=415, Percent_Identity=38.5542168674699, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI2367379, Length=458, Percent_Identity=22.9257641921397, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789152, Length=431, Percent_Identity=22.0417633410673, Blast_Score=75, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6322025, Length=199, Percent_Identity=33.1658291457286, Blast_Score=100, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6321698, Length=339, Percent_Identity=24.7787610619469, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324410, Length=170, Percent_Identity=24.7058823529412, Blast_Score=78, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322612, Length=267, Percent_Identity=22.8464419475655, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323032, Length=265, Percent_Identity=23.7735849056604, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6319876, Length=262, Percent_Identity=23.6641221374046, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321502, Length=253, Percent_Identity=26.4822134387352, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47462; Mature: 47462

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]