| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184825
Identifier: 189184825
GI number: 189184825
Start: 1953599
End: 1953745
Strand: Direct
Name: 189184825
Synonym: OTT_1918
Alternate gene names: NA
Gene position: 1953599-1953745 (Clockwise)
Preceding gene: 189184824
Following gene: 189184826
Centisome position: 97.24
GC content: 35.37
Gene sequence:
>147_bases ATGAGCATTAAAATCAGAGTTTATGCCATTACAATGCTATTATTGTTACAAGCTCCAGTATCACTGGCTTGGAATATAGA AAATGTATTTCAAGGAATGAGTGTTAATGTCACTAGAGCTGGATCATATCAAGATCAAGCGGCTTGA
Upstream 100 bases:
>100_bases GTAAAAAAATATATGCAGTAGCTAGAGGCATAATTTCTGAAGATAAAATTATCGACAATATTCTAGCAATCGATAGATAT TATCATAAGTTGGAGACTAG
Downstream 100 bases:
>100_bases TATTATGCGGCTGGGGGATTATCTGCCAGAACAAGCCAAACATCCTTTCAACCATTTGCTATAACTCCACCATCTTTAAA CATGAGCTGTAGCGGTATTG
Product: putative conjugative transfer protein TraH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MSIKIRVYAITMLLLLQAPVSLAWNIENVFQGMSVNVTRAGSYQDQAA
Sequences:
>Translated_48_residues MSIKIRVYAITMLLLLQAPVSLAWNIENVFQGMSVNVTRAGSYQDQAA >Mature_47_residues SIKIRVYAITMLLLLQAPVSLAWNIENVFQGMSVNVTRAGSYQDQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5313; Mature: 5182
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKIRVYAITMLLLLQAPVSLAWNIENVFQGMSVNVTRAGSYQDQAA CCEEEEHHHHHHHHHHHCCCCEEECHHHHHCCCEEEEEECCCCCCCCC >Mature Secondary Structure SIKIRVYAITMLLLLQAPVSLAWNIENVFQGMSVNVTRAGSYQDQAA CEEEEHHHHHHHHHHHCCCCEEECHHHHHCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA