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The map label for this gene is 189184824

Identifier: 189184824

GI number: 189184824

Start: 1952880

End: 1953602

Strand: Direct

Name: 189184824

Synonym: OTT_1917

Alternate gene names: NA

Gene position: 1952880-1953602 (Clockwise)

Preceding gene: 189184823

Following gene: 189184825

Centisome position: 97.21

GC content: 34.16

Gene sequence:

>723_bases
ATGAATCCATTAGCAATAATGCTAACTATTGGGCTACTTAATTACTTGTCGATAGAATTAGCTACTGCTAACTCTTTGCC
TACAGGGTTTTTATGGTACAATGATAAACATGGTCATGAGCCTAATGAATCTTCAGCTAATTCTAAGTTGATGAGTAGGC
CTCATGATCATAGAATTGAGGAATTAAAGGAGCAATTTAATCGAGCTCAGCGTATAGCGCTTGATAATCCAACGCTCGAA
AATGTGATTACAGCTCAAAGGCTACAGAAACAAATCATGGAGAAGGCGCATAAGTTTGCTACTATGTGGCAACTAGCTAC
TCTACTTGATTATCAACTGATTAATGCTAATGAGCCTGCTAATAGCTTACATAGAAAACTGTATCAAGAAAAATCAGAAC
AAGAAAACGACTCAAAACTTAAAAACATTGCTAAAAACTGGGGATTAATTTTGCAAGTTAAAGAAGATTGCTTGCTATGT
AAGGCCTTTATTCCTATTGTTCAGAGCTTTGCTAATAAATATGCATTTCAGTTGCTAGCTGTCAGTAAGAATAATGAGTT
GCTTAATAAACTAAATCCTAAGCATATTGTACCTGTATTATATCTAGTAGCTAGCGATGGTAAAAAAATATATGCAGTAG
CTAGAGGCATAATTTCTGAAGATAAAATTATCGACAATATTCTAGCAATCGATAGATATTATCATAAGTTGGAGACTAGA
TGA

Upstream 100 bases:

>100_bases
TTATGGGTTATAGTTGAAGCATTTTAGCAGTCTTTGATTGCATCATGCTTCTCTTCTTTGACTAAACTTCATTTTAAATA
GATATAAAAATAATGCAATA

Downstream 100 bases:

>100_bases
GCATTAAAATCAGAGTTTATGCCATTACAATGCTATTATTGTTACAAGCTCCAGTATCACTGGCTTGGAATATAGAAAAT
GTATTTCAAGGAATGAGTGT

Product: putative conjugative transfer protein TraF

Products: NA

Alternate protein names: Conjugative Transfer Protein TraF; TPR Repeat-Containing Protein; Pilus Assembly And Synthesis Protein; Conjugative Pilus Assembly Protein; Conjugal Transfer Protein TraF

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNPLAIMLTIGLLNYLSIELATANSLPTGFLWYNDKHGHEPNESSANSKLMSRPHDHRIEELKEQFNRAQRIALDNPTLE
NVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQENDSKLKNIAKNWGLILQVKEDCLLC
KAFIPIVQSFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYLVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETR

Sequences:

>Translated_240_residues
MNPLAIMLTIGLLNYLSIELATANSLPTGFLWYNDKHGHEPNESSANSKLMSRPHDHRIEELKEQFNRAQRIALDNPTLE
NVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQENDSKLKNIAKNWGLILQVKEDCLLC
KAFIPIVQSFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYLVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETR
>Mature_240_residues
MNPLAIMLTIGLLNYLSIELATANSLPTGFLWYNDKHGHEPNESSANSKLMSRPHDHRIEELKEQFNRAQRIALDNPTLE
NVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPANSLHRKLYQEKSEQENDSKLKNIAKNWGLILQVKEDCLLC
KAFIPIVQSFANKYAFQLLAVSKNNELLNKLNPKHIVPVLYLVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27576; Mature: 27576

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLAIMLTIGLLNYLSIELATANSLPTGFLWYNDKHGHEPNESSANSKLMSRPHDHRIE
CCHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHH
ELKEQFNRAQRIALDNPTLENVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
NSLHRKLYQEKSEQENDSKLKNIAKNWGLILQVKEDCLLCKAFIPIVQSFANKYAFQLLA
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEE
VSKNNELLNKLNPKHIVPVLYLVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETR
ECCCHHHHHHCCCHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNPLAIMLTIGLLNYLSIELATANSLPTGFLWYNDKHGHEPNESSANSKLMSRPHDHRIE
CCHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCHHHHH
ELKEQFNRAQRIALDNPTLENVITAQRLQKQIMEKAHKFATMWQLATLLDYQLINANEPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
NSLHRKLYQEKSEQENDSKLKNIAKNWGLILQVKEDCLLCKAFIPIVQSFANKYAFQLLA
HHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEE
VSKNNELLNKLNPKHIVPVLYLVASDGKKIYAVARGIISEDKIIDNILAIDRYYHKLETR
ECCCHHHHHHCCCHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA