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The map label for this gene is traH [H]

Identifier: 189184826

GI number: 189184826

Start: 1953827

End: 1954492

Strand: Direct

Name: traH [H]

Synonym: OTT_1919

Alternate gene names: 189184826

Gene position: 1953827-1954492 (Clockwise)

Preceding gene: 189184825

Following gene: 189184827

Centisome position: 97.25

GC content: 36.94

Gene sequence:

>666_bases
ATGAGCTGTAGCGGTATTGACGCCTATCTTGGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAACTAATGAAGAA
TATTGGTTCTCAAGCTAAAGTTTATGCATTTTCATTAGGATTAAAAACCTTTGCTCCTCAAATTGAGAATGCTCTCAAAG
ACTTACGTAATCTAGCAATGGAGATGAATCAATTTGCTAAGGGAGATTGCGAATTAACAAAAGCATTATTTGCTACAGCT
TTACCAAGAAACTCAGTTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGCGGGTTTGATTATTTTGCAGCTGG
TAAAAAATGTCGTAATTATTTAGATCAAAAACAAGCTCTGAGACAAGCGCAAAATAAGGATTCAGAGTTAATGCTTGATG
ATTATAACATCTTCACTAAAGCAGCAGCGAAGGTTGGAATACCATCAAATATGCGTGATTCAATCATGTCTATGACTGGC
ACTATCGTGGTTACAAACAATAATGTACACTTTTATGACTCCTTAGCTCAGGACGAAAAAAGTTGGATTAGTCATTTAAA
AGGCGGAGAATCAGCCTCGATTTACAGTTGTGATAATGTCAGTTGCTTGCATTCAACGCTTGCGACGAAATATCACAATA
TCACCAGAGCAGTCTTATGCAGGTAA

Upstream 100 bases:

>100_bases
TCAAGATCAAGCGGCTTGATATTATGCGGCTGGGGGATTATCTGCCAGAACAAGCCAAACATCCTTTCAACCATTTGCTA
TAACTCCACCATCTTTAAAC

Downstream 100 bases:

>100_bases
AGCTAAACAACAATTGACTAATCTAAAAAATAAGTTTGATTATAATACTGAATTTAGTAACCATGAAATAGCCTTTTTAT
CTTCGATTGGAGATATATTT

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATA
LPRNSVMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSNMRDSIMSMTG
TIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDNVSCLHSTLATKYHNITRAVLCR

Sequences:

>Translated_221_residues
MSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATA
LPRNSVMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSNMRDSIMSMTG
TIVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDNVSCLHSTLATKYHNITRAVLCR
>Mature_220_residues
SCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAMEMNQFAKGDCELTKALFATAL
PRNSVMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQALRQAQNKDSELMLDDYNIFTKAAAKVGIPSNMRDSIMSMTGT
IVVTNNNVHFYDSLAQDEKSWISHLKGGESASIYSCDNVSCLHSTLATKYHNITRAVLCR

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 24457; Mature: 24326

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAM
CCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMNQFAKGDCELTKALFATALPRNSVMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQAL
HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RQAQNKDSELMLDDYNIFTKAAAKVGIPSNMRDSIMSMTGTIVVTNNNVHFYDSLAQDEK
HHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCEEEHHHHHHHHH
SWISHLKGGESASIYSCDNVSCLHSTLATKYHNITRAVLCR
HHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SCSGIDAYLGSFSVISGEELVQLMKNIGSQAKVYAFSLGLKTFAPQIENALKDLRNLAM
CCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMNQFAKGDCELTKALFATALPRNSVMREAVCRDIQSQSGFDYFAAGKKCRNYLDQKQAL
HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RQAQNKDSELMLDDYNIFTKAAAKVGIPSNMRDSIMSMTGTIVVTNNNVHFYDSLAQDEK
HHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCEEEEECCCEEEHHHHHHHHH
SWISHLKGGESASIYSCDNVSCLHSTLATKYHNITRAVLCR
HHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]