Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184765

Identifier: 189184765

GI number: 189184765

Start: 1889359

End: 1890219

Strand: Direct

Name: 189184765

Synonym: OTT_1858

Alternate gene names: NA

Gene position: 1889359-1890219 (Clockwise)

Preceding gene: 189184757

Following gene: 189184766

Centisome position: 94.05

GC content: 30.2

Gene sequence:

>861_bases
ATGCTAAAATCATATAGCCAAGACTTTCGGGAGGAAGTAATAAAATGTGTTAATCAAGGAAAAAGTTGTAATGATGCCTC
AGTAAAATTTGATATAGCAGCAAACACAGTAAGAAATTGGTATAAAAGATATAAATCAGAAGGTCATTATAAAGAAAGAG
ATCGTCTTGGTAAAAAAGGAAAAATATATAAGATAGAATTTGAAAAATACATTTTGCTAAATCAAAATCTAACTCTGGTA
CAAACAGGAAAACATTTTGGAATTTTAATAAGAGTAGCGAGTTATTACATGAAAAAATTCGGCTATAGTTATAAAAAAAC
GTTTACCTACATGGAAGCAAAACCAGAAATAAGAGAAAAATATCAACAAGTAATAGGTTCTATACCTAAGGAAAACTTGG
CATACATAGATGAAAGTGGCATTGAAATGTCTATATGCAATGATAGATGGTGGAGCAAAAAAGGAACTCATGTAAGCAGC
AAAAAGAGTGGTAAATATTACGAGCGCACAAATATTATAGCTGGTTATGTTAATAATAAATCAATCGCACCTATGATATT
TAATGGTGCATGTAATACAAGATTATTTGAAGCTTGGGTGCAGCAGGTATTAATTAATGAGTTAAAGCCTGCTCAGTTTG
TAGTAATCGATAATGCTGCGTTTCATAAGTCTAAAAAAACTAAAGAGTTAATAGAATCTGTTGGTTGTAAAGTTATTTTT
CTTCCACCTTATTCTCCAGATTTAAATCCGATAGAAAAATTTTCGGCTAATATGAAGCGGTGGATTAGACATCAAATTAC
TCAATTTGCTAAATCTTATGATTCTATTATCTCTTTTTTCTATGCTCAAACTTCATTGTAA

Upstream 100 bases:

>100_bases
TTACATATCTAAAGGGTTATTTCATCAACTGCTGACCAATGGTCTACGTTTATTTATAGTCATTTACAATGAAGTTTGAG
TATAGTATTCTGAAAAGAAA

Downstream 100 bases:

>100_bases
ATGACTATACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATACAAGATAATCGGTTATTAAATAAACGTTCT
TTAATTGAGTCTGTCTTTAA

Product: transposase

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase IS; Transposase Of IS; Transposase For Insertion Sequence Element; ISRin2 Transposase OrfB; Transposase Family Protein; Degenerate Transposase; ISSoc4 Transposase OrfAB; Transposase And Inactivated Derivative; ISHde1 Transposase OrfB; Transposase Fragment

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYILLNQNLTLV
QTGKHFGILIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVIGSIPKENLAYIDESGIEMSICNDRWWSKKGTHVSS
KKSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF
LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL

Sequences:

>Translated_286_residues
MLKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYILLNQNLTLV
QTGKHFGILIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVIGSIPKENLAYIDESGIEMSICNDRWWSKKGTHVSS
KKSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF
LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL
>Mature_286_residues
MLKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKGKIYKIEFEKYILLNQNLTLV
QTGKHFGILIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVIGSIPKENLAYIDESGIEMSICNDRWWSKKGTHVSS
KKSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF
LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33398; Mature: 33398

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKG
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
KIYKIEFEKYILLNQNLTLVQTGKHFGILIRVASYYMKKFGYSYKKTFTYMEAKPEIREK
CEEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHEEHCCCCHHHHHH
YQQVIGSIPKENLAYIDESGIEMSICNDRWWSKKGTHVSSKKSGKYYERTNIIAGYVNNK
HHHHHHCCCCCHHHEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCC
SIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF
CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHCCCEEEE
LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDRLGKKG
CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHCCCCC
KIYKIEFEKYILLNQNLTLVQTGKHFGILIRVASYYMKKFGYSYKKTFTYMEAKPEIREK
CEEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHEEHCCCCHHHHHH
YQQVIGSIPKENLAYIDESGIEMSICNDRWWSKKGTHVSSKKSGKYYERTNIIAGYVNNK
HHHHHHCCCCCHHHEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCC
SIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF
CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHCCCEEEE
LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA