| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184766
Identifier: 189184766
GI number: 189184766
Start: 1893427
End: 1894326
Strand: Direct
Name: 189184766
Synonym: OTT_1859
Alternate gene names: NA
Gene position: 1893427-1894326 (Clockwise)
Preceding gene: 189184765
Following gene: 189184767
Centisome position: 94.25
GC content: 30.89
Gene sequence:
>900_bases TTGAGACCTAAAAAACATAAAACACCAGCCAATAAGTATAATTTAGAAGAATATCTTAATCAAAATGCTGAGGTAAAAAA CATTCTGGAAGAAGTTCCAGCAGTTAAGAAATATATTGGAAATATTCTTAAAACTTATAGTTATTGTAAGAAAGATTTGG ATTTGATATTTGCTAAGACAGGCGCTTGCTATACAAACATAGACCATGTTAAAATGCTGATACAACATGGTAATATTCAA GCAGCTAGTATTTCTAGTCTCTTACGTTGCCACAATACAAGAGCTAAAACATTAGTAGCTCTATTACCTAAATTAACAGA TTCTAGAGTACTATTACTAAAGGAATATGGAATCGCTTTTTCTAGCATTGTCAGTATTGTAAGAGGTGTACATTCTAATA ACATTGCAACTGCTATAGAAGAAGTATTAAATACAACACTTGTACTACAAGCAAATGGTGCTTATACATTATCACCTCAG TTAACAAAAGTATTAGAATACTATAAGTGTTCATTTACTAATATTGCTAACATCTTACGTGTTGTTAAATCTAATATTAG TGCAGTTTTATCAGAATTATTACAGATATTAGAAAGTTCCAAAATAAGTGACCTACACAAGAAGCTAGATATTAATTTTT CTAGTTTTAGTAGTATCTTAAACGGAGCTGGGGCTACTTGTATACAAGCCCTAGAAAAGCTATTACAGATATTAGATCAC TCTAAAATACAAGAATTAAAGAACCAGGGAATTCCTTTTTCTAATATTAGTAATATCTTAAGTGGAGCTGGAGCTGCTGG CCCACAAGCTTTAGAACAGCTATTACAAATGTTAGACAACCCTATACTGCTAAAATTAGAGATCAGGGGAATTTTTTTTC TAATATTAGTAGTGTCTTAG
Upstream 100 bases:
>100_bases CAATTTGCTGTTAATCTAATTTTAATATTCATAACTAAAGTTTTTAATGATTTGTCCTTATTTTAGAAAGTTTTAAATAA ACTTACAAAAGATTAACAAC
Downstream 100 bases:
>100_bases GAAGGGCTGGAGCTGCTGGCCCACAAGCTTTAGAACAGCTATTACAGACATTAGATGATTCTATAATACAAGAATTAGAG CGCAAGGGAATTCCTTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRPKKHKTPANKYNLEEYLNQNAEVKNILEEVPAVKKYIGNILKTYSYCKKDLDLIFAKTGACYTNIDHVKMLIQHGNIQ AASISSLLRCHNTRAKTLVALLPKLTDSRVLLLKEYGIAFSSIVSIVRGVHSNNIATAIEEVLNTTLVLQANGAYTLSPQ LTKVLEYYKCSFTNIANILRVVKSNISAVLSELLQILESSKISDLHKKLDINFSSFSSILNGAGATCIQALEKLLQILDH SKIQELKNQGIPFSNISNILSGAGAAGPQALEQLLQMLDNPILLKLEIRGIFFLILVVS
Sequences:
>Translated_299_residues MRPKKHKTPANKYNLEEYLNQNAEVKNILEEVPAVKKYIGNILKTYSYCKKDLDLIFAKTGACYTNIDHVKMLIQHGNIQ AASISSLLRCHNTRAKTLVALLPKLTDSRVLLLKEYGIAFSSIVSIVRGVHSNNIATAIEEVLNTTLVLQANGAYTLSPQ LTKVLEYYKCSFTNIANILRVVKSNISAVLSELLQILESSKISDLHKKLDINFSSFSSILNGAGATCIQALEKLLQILDH SKIQELKNQGIPFSNISNILSGAGAAGPQALEQLLQMLDNPILLKLEIRGIFFLILVVS >Mature_299_residues MRPKKHKTPANKYNLEEYLNQNAEVKNILEEVPAVKKYIGNILKTYSYCKKDLDLIFAKTGACYTNIDHVKMLIQHGNIQ AASISSLLRCHNTRAKTLVALLPKLTDSRVLLLKEYGIAFSSIVSIVRGVHSNNIATAIEEVLNTTLVLQANGAYTLSPQ LTKVLEYYKCSFTNIANILRVVKSNISAVLSELLQILESSKISDLHKKLDINFSSFSSILNGAGATCIQALEKLLQILDH SKIQELKNQGIPFSNISNILSGAGAAGPQALEQLLQMLDNPILLKLEIRGIFFLILVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33033; Mature: 33033
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPKKHKTPANKYNLEEYLNQNAEVKNILEEVPAVKKYIGNILKTYSYCKKDLDLIFAKT CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GACYTNIDHVKMLIQHGNIQAASISSLLRCHNTRAKTLVALLPKLTDSRVLLLKEYGIAF CCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHCHHH SSIVSIVRGVHSNNIATAIEEVLNTTLVLQANGAYTLSPQLTKVLEYYKCSFTNIANILR HHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHH VVKSNISAVLSELLQILESSKISDLHKKLDINFSSFSSILNGAGATCIQALEKLLQILDH HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SKIQELKNQGIPFSNISNILSGAGAAGPQALEQLLQMLDNPILLKLEIRGIFFLILVVS HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MRPKKHKTPANKYNLEEYLNQNAEVKNILEEVPAVKKYIGNILKTYSYCKKDLDLIFAKT CCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GACYTNIDHVKMLIQHGNIQAASISSLLRCHNTRAKTLVALLPKLTDSRVLLLKEYGIAF CCHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHCHHH SSIVSIVRGVHSNNIATAIEEVLNTTLVLQANGAYTLSPQLTKVLEYYKCSFTNIANILR HHHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCCEEECHHHHHHHHHHHCCHHHHHHHHH VVKSNISAVLSELLQILESSKISDLHKKLDINFSSFSSILNGAGATCIQALEKLLQILDH HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH SKIQELKNQGIPFSNISNILSGAGAAGPQALEQLLQMLDNPILLKLEIRGIFFLILVVS HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA