| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is dam [H]
Identifier: 189184757
GI number: 189184757
Start: 1881822
End: 1882634
Strand: Direct
Name: dam [H]
Synonym: OTT_1850
Alternate gene names: 189184757
Gene position: 1881822-1882634 (Clockwise)
Preceding gene: 189184753
Following gene: 189184765
Centisome position: 93.67
GC content: 30.75
Gene sequence:
>813_bases GTGTCAATAGCAATTTCTAATGAACCAAAGCCTTTTCTTCACTGGGTTGGAGGTAAAAGGAGAATTGTTAATAAATTAAT AAAGCATCTTCCTTCAGGGCCATACTATAATTACTATGAACCATTCCTTGGTGGAGGTGCTTTATTTTTTCAAGTTAGGC ATCTGTTTAAACAATGTTTTTTGTCTGATATTAATCTTGACTTAATTACTAGTTATCACGCTGTAAAAAAGAATCCAAAT GAGGTCAATAGATTACTAAATCTATATCACAAAAACCATTCTGAAAATCACTACTATAAAATAAGAGACAATTATTATAG TAATGATCCTAACGATATCACGGCAAAATTTATATATCTTAATAAATATTCCTTTAGGGGAATTTATAGGCTAAACAGAG ATGGTACATCCGCTCAAACATTTTCTGATAAGCGATATCTTAAGCTTCATATTTGCTCTAAAATAAATAAATGTAGCAAA CTTTTAACTGGCACATCCATTTGTGCAATGGATTTTTCGTTTATAGAACCTAAAAAAGGTGACTTCATTTATCTTGATCC GCCTTACCACCAATCTGGAGAACGGTTCTACACTAGAGTCCCATTTGATGAAAAAGAGCAAATCAGATTACGAGATTTTG TATATGAACTAACCAATAAAGGTATTAAAATTATGCTTTCAAATAATAATACTGCATTCATTAGAGACATATACAAAGAC TTTTTCATCACTCATATTCCAGTCACATACTCAATCAATCAACAACGAAACACTGTTAATGAGCTAATCATTACTAACTA TAAAACTTATTAG
Upstream 100 bases:
>100_bases AAGATTTATAAAAAAAGCTCTGCAGCAGTTATTATTACTGGCTTTAAGGCTTATTTTCTGCTATAATTCATAGTAGAGAT TTAATTAATCAAAAATTCTT
Downstream 100 bases:
>100_bases TTATTAGAAATGAAACCGCGATCCAAAACGTATATGAATAGGAAGTGGGATATAGTTAGCTATTGTGCTACATTCAATGT CTAAATATATATCTTTTGAT
Product: N6 adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: DNA adenine methyltransferase; Deoxyadenosyl-methyltransferase; M.TpaI [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSK LLTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD FFITHIPVTYSINQQRNTVNELIITNYKTY
Sequences:
>Translated_270_residues MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSK LLTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD FFITHIPVTYSINQQRNTVNELIITNYKTY >Mature_269_residues SIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPNE VNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKL LTGTSICAMDFSFIEPKKGDFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKDF FITHIPVTYSINQQRNTVNELIITNYKTY
Specific function: Methylates DNA within the sequence GATC. Directly involved in methyl-directed DNA mismatch repair, DNA replication, and gene expression [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=268, Percent_Identity=29.1044776119403, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32017; Mature: 31886
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF CEEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKLLTGTSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHCCCCCC DFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHH FFITHIPVTYSINQQRNTVNELIITNYKTY HHEEECEEEEEECCHHHHHHHHEEECCCCC >Mature Secondary Structure SIAISNEPKPFLHWVGGKRRIVNKLIKHLPSGPYYNYYEPFLGGGALFFQVRHLFKQCF EEEECCCCCHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENHYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSKINKCSKLLTGTSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHCCCCCC DFIYLDPPYHQSGERFYTRVPFDEKEQIRLRDFVYELTNKGIKIMLSNNNTAFIRDIYKD CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHH FFITHIPVTYSINQQRNTVNELIITNYKTY HHEEECEEEEEECCHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9345771; 9665876 [H]