| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184727
Identifier: 189184727
GI number: 189184727
Start: 1850911
End: 1851204
Strand: Direct
Name: 189184727
Synonym: OTT_1820
Alternate gene names: NA
Gene position: 1850911-1851204 (Clockwise)
Preceding gene: 189184726
Following gene: 189184728
Centisome position: 92.13
GC content: 30.61
Gene sequence:
>294_bases ATGAAGCTTTTATTATTGCTATTGGGCTGTATGAGCCTAACAAGCTTCTTTTTCGAAAGTAATTTTGACTGTAAAATTCC TAAAGGTCAAAAATGTAAGTCTTTATATGAAATAAAGAAAATGGCTGCTCAAGGCGTTTTTGACCCTGATAATGTTGAGA AAGTTGAAGCAAAAAAAACTCGAAAAAAGACTTGTATTACATGTTATAGAAGACGTGTTGATAAAAACTCTAAGAAATAC CTAATTAATTTATTTAAACCAAAACAGAGTCAAGGTGAACGCAAGCATACATAA
Upstream 100 bases:
>100_bases AGAAGTTAAAAAATTCAACTTATGCACCATCAACTAGCCATGAAAAAGTTAATTCTCATAATCAATTTAACCAATCACAA AAGCTAGAGGAGCATTTATA
Downstream 100 bases:
>100_bases GGATTTTGATCGAGAAAGATTTTCTAAACATTTTGTCTATGAATCGTATGATGAGGAGACTCAGCTATTCTTTAATCGTG GTTCAATAGGTTTTGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKLLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKKMAAQGVFDPDNVEKVEAKKTRKKTCITCYRRRVDKNSKKY LINLFKPKQSQGERKHT
Sequences:
>Translated_97_residues MKLLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKKMAAQGVFDPDNVEKVEAKKTRKKTCITCYRRRVDKNSKKY LINLFKPKQSQGERKHT >Mature_97_residues MKLLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKKMAAQGVFDPDNVEKVEAKKTRKKTCITCYRRRVDKNSKKY LINLFKPKQSQGERKHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11342; Mature: 11342
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKKMAAQGVFDPDNVEKVEAKKT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RKKTCITCYRRRVDKNSKKYLINLFKPKQSQGERKHT HHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLLLLLLGCMSLTSFFFESNFDCKIPKGQKCKSLYEIKKMAAQGVFDPDNVEKVEAKKT CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RKKTCITCYRRRVDKNSKKYLINLFKPKQSQGERKHT HHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA