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The map label for this gene is traB [H]

Identifier: 189184726

GI number: 189184726

Start: 1849577

End: 1850911

Strand: Direct

Name: traB [H]

Synonym: OTT_1819

Alternate gene names: 189184726

Gene position: 1849577-1850911 (Clockwise)

Preceding gene: 189184725

Following gene: 189184727

Centisome position: 92.07

GC content: 34.91

Gene sequence:

>1335_bases
GTGGAACAGGACAATTCAGACAATGAAAATACAAAAGAAGAAGATTTAGATCTAAATGATAAACCTACAGCTAAATCTGC
TGTCAGATCTAATAGCAAGTTATCAGAATTAGCGAGTATTATTCGCCGAAAGCCAGTAATTGCCTTAACTTTTATAAGTA
TCACAATAATGGTTGTTTCGTATTTTTTATCTGAAAGTGGTAAGACGAAAGAACCTATAACTTTTACAGAAAATCGTGAG
TCAAGAGAAGCGATTTCTGGAGTAGAACAAGCTGTAGATTTGAGAGCGAAATGGACAGAGGAAATACTTAATGAAGTCAA
AACATTAAAAGATAGATTAGAAAGTGTAATAGAAAGCAGATATTTAGAAACTACAGCCAAAATTAATAATTTTAACCAAA
AACTTGAGATATTGGAGAATCAGCCTAAGCAAACTCTGTATAATAATGATGGTGATGAGTTTAGTTCTGATCTTAATCAT
CATATTTTAAATTCACCACATGATAACAAGACAAAGCAAGCTCCTGTAGTAGTTGTAAAATCATTTGTAAATCTTAGGAG
AGCTGGAGCTGAACCAAAAAAGAATGTTGAGAACTATGTTACTAGCGGTAGTTCTGCTAGAGCTGTGCTACTTACTGGAG
TCGTTGTAGGTACTGGAACTAACAGCTCTTCATCACCAGAACCAATTGTTCTGCAGCTATTAGATACAGCTATTCTTTAT
GATGAATATAAAACTGATCAAATCAAAAAGGCAATTTTAATTGGATCATGTAATGGAGATATTTCCTCAGAGAGAGCTAA
ATGTCGCATCGAAACTCTTTCAGTAGTCAATAAACAAGGAGATATTATCGAGAAACATGTAGAAGGCTGGTTGATAGGCG
AAGACGGACGTTCTGGAATTAAAGGAATCGTAGTAGATAAATCTTCTAGCGTAGTAAGAATGGCTGCATTAAATGGAGTA
TTTAGCAGTATGGCTAAGTTTCTGCAAGCTAAGGCTATTAAACCTGATATGACACCAACTTTAAACCTAGTAGCTGGAGG
TCATCAACAACAAGAGTTTCAGATTGGAGATGCACTAAAATCTGGAGCTTACTCTGGAGCTAGCAATGCTTTTGATAAGT
TGGCTGATTTTGCTATAAAACGAGCTGATTCCATGAGCCCAGTCATTGTTGTTGCCTCAGGTAGAGTCATAGATGTTGTA
TTTAAAAAAGGTTTTGACTTATGCGAGCACAAAAAGAAGTTAAAAAATTCAACTTATGCACCATCAACTAGCCATGAAAA
AGTTAATTCTCATAATCAATTTAACCAATCACAAAAGCTAGAGGAGCATTTATAA

Upstream 100 bases:

>100_bases
TAGGCTTTTACCTAGATTGGATTGCCAGTGGTATGAAAATAACTTAGCGTAAATTAATTTATTGATAAGTTAGAAACATC
ATTCAAAAAGCGGAGGAATA

Downstream 100 bases:

>100_bases
TGAAGCTTTTATTATTGCTATTGGGCTGTATGAGCCTAACAAGCTTCTTTTTCGAAAGTAATTTTGACTGTAAAATTCCT
AAAGGTCAAAAATGTAAGTC

Product: putative conjugative transfer protein TraB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MEQDNSDNENTKEEDLDLNDKPTAKSAVRSNSKLSELASIIRRKPVIALTFISITIMVVSYFLSESGKTKEPITFTENRE
SREAISGVEQAVDLRAKWTEEILNEVKTLKDRLESVIESRYLETTAKINNFNQKLEILENQPKQTLYNNDGDEFSSDLNH
HILNSPHDNKTKQAPVVVVKSFVNLRRAGAEPKKNVENYVTSGSSARAVLLTGVVVGTGTNSSSSPEPIVLQLLDTAILY
DEYKTDQIKKAILIGSCNGDISSERAKCRIETLSVVNKQGDIIEKHVEGWLIGEDGRSGIKGIVVDKSSSVVRMAALNGV
FSSMAKFLQAKAIKPDMTPTLNLVAGGHQQQEFQIGDALKSGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVV
FKKGFDLCEHKKKLKNSTYAPSTSHEKVNSHNQFNQSQKLEEHL

Sequences:

>Translated_444_residues
MEQDNSDNENTKEEDLDLNDKPTAKSAVRSNSKLSELASIIRRKPVIALTFISITIMVVSYFLSESGKTKEPITFTENRE
SREAISGVEQAVDLRAKWTEEILNEVKTLKDRLESVIESRYLETTAKINNFNQKLEILENQPKQTLYNNDGDEFSSDLNH
HILNSPHDNKTKQAPVVVVKSFVNLRRAGAEPKKNVENYVTSGSSARAVLLTGVVVGTGTNSSSSPEPIVLQLLDTAILY
DEYKTDQIKKAILIGSCNGDISSERAKCRIETLSVVNKQGDIIEKHVEGWLIGEDGRSGIKGIVVDKSSSVVRMAALNGV
FSSMAKFLQAKAIKPDMTPTLNLVAGGHQQQEFQIGDALKSGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVV
FKKGFDLCEHKKKLKNSTYAPSTSHEKVNSHNQFNQSQKLEEHL
>Mature_444_residues
MEQDNSDNENTKEEDLDLNDKPTAKSAVRSNSKLSELASIIRRKPVIALTFISITIMVVSYFLSESGKTKEPITFTENRE
SREAISGVEQAVDLRAKWTEEILNEVKTLKDRLESVIESRYLETTAKINNFNQKLEILENQPKQTLYNNDGDEFSSDLNH
HILNSPHDNKTKQAPVVVVKSFVNLRRAGAEPKKNVENYVTSGSSARAVLLTGVVVGTGTNSSSSPEPIVLQLLDTAILY
DEYKTDQIKKAILIGSCNGDISSERAKCRIETLSVVNKQGDIIEKHVEGWLIGEDGRSGIKGIVVDKSSSVVRMAALNGV
FSSMAKFLQAKAIKPDMTPTLNLVAGGHQQQEFQIGDALKSGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVV
FKKGFDLCEHKKKLKNSTYAPSTSHEKVNSHNQFNQSQKLEEHL

Specific function: Involved in F pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 48929; Mature: 48929

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDNSDNENTKEEDLDLNDKPTAKSAVRSNSKLSELASIIRRKPVIALTFISITIMVVS
CCCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YFLSESGKTKEPITFTENRESREAISGVEQAVDLRAKWTEEILNEVKTLKDRLESVIESR
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLETTAKINNFNQKLEILENQPKQTLYNNDGDEFSSDLNHHILNSPHDNKTKQAPVVVVK
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
SFVNLRRAGAEPKKNVENYVTSGSSARAVLLTGVVVGTGTNSSSSPEPIVLQLLDTAILY
HHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
DEYKTDQIKKAILIGSCNGDISSERAKCRIETLSVVNKQGDIIEKHVEGWLIGEDGRSGI
HHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCCCCC
KGIVVDKSSSVVRMAALNGVFSSMAKFLQAKAIKPDMTPTLNLVAGGHQQQEFQIGDALK
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHH
SGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVVFKKGFDLCEHKKKLKNSTYA
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHCCCHHHHHHHHHCCCCCC
PSTSHEKVNSHNQFNQSQKLEEHL
CCCCHHHHCCHHHCCHHHHHHHCC
>Mature Secondary Structure
MEQDNSDNENTKEEDLDLNDKPTAKSAVRSNSKLSELASIIRRKPVIALTFISITIMVVS
CCCCCCCCCCCCHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
YFLSESGKTKEPITFTENRESREAISGVEQAVDLRAKWTEEILNEVKTLKDRLESVIESR
HHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLETTAKINNFNQKLEILENQPKQTLYNNDGDEFSSDLNHHILNSPHDNKTKQAPVVVVK
HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
SFVNLRRAGAEPKKNVENYVTSGSSARAVLLTGVVVGTGTNSSSSPEPIVLQLLDTAILY
HHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
DEYKTDQIKKAILIGSCNGDISSERAKCRIETLSVVNKQGDIIEKHVEGWLIGEDGRSGI
HHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCCCCCC
KGIVVDKSSSVVRMAALNGVFSSMAKFLQAKAIKPDMTPTLNLVAGGHQQQEFQIGDALK
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHH
SGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVVFKKGFDLCEHKKKLKNSTYA
HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHCCCHHHHHHHHHCCCCCC
PSTSHEKVNSHNQFNQSQKLEEHL
CCCCHHHHCCHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7915817; 8655498 [H]