Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184428

Identifier: 189184428

GI number: 189184428

Start: 1550821

End: 1551489

Strand: Direct

Name: 189184428

Synonym: OTT_1521

Alternate gene names: NA

Gene position: 1550821-1551489 (Clockwise)

Preceding gene: 189184422

Following gene: 189184432

Centisome position: 77.19

GC content: 27.8

Gene sequence:

>669_bases
ATGAGCGGTAATAAAAATTTACTGGCTGTAGATGCAGCTAAATTTACATTAAAAAATTCTGGTAAATATTTTTACTTTAA
ATCAAATAAATCAGATGAAGACAATCACATGTTTATAATTGGAAACAGTGGCAACTCTATACATACAAAGCTTGACTTAG
AAACATATAACATGTTTAAAGCGATGCTAAATAATGATTATTGTATGGATTTAGAGACATTTGAGACATTCTCTATAAGA
AAAAATATTACAGCTAATAATGAGGATATTTCTACGAACAATCTAGTTAATACATTAACATTTTTTAGTAAAATTCTTCC
AGATATTTCAAATATATCCTTACACAAGGAAGTAATAACTAATGTAATTAAGTATATAATAGAGTTAAGAGGAGTACGGA
GTGATGTTGTGCTTGATACACTGATTAATGAAATATGTGAGAATATAAATCTAGATAAAAATATTTTTTCTCTGGAGTTT
GAAGATCATCATTTTGATGAATACGATGCTGATGGTGGAGTTTTAGTTGAAAAAAATAAACAAACAGTGACCAATATTGA
CTCTCAAAATCTTAAAACTGCTACCTATGATGAAAGTAATGCTGGTTTTGATAGTATATCTGTTATGATTGGAGAAAACG
AATGTTTAGTAACCAAAAGCTCGATGTAA

Upstream 100 bases:

>100_bases
TACTCAGAAAATAAGTATTGCTAAATATTTATTTTTTGTTATATTTACTTAAGAGTAATTATAATTATTTTAAATATAAT
TAATAATATGGTATCAAAAT

Downstream 100 bases:

>100_bases
GGAAAAGCGCAAAACTGTAAAAATGATAAGCATTACAACCATAGTGTAATACATAAAGGTAAAGATAAGAATAAAGAAAG
CATATTAAAAACTACTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSGNKNLLAVDAAKFTLKNSGKYFYFKSNKSDEDNHMFIIGNSGNSIHTKLDLETYNMFKAMLNNDYCMDLETFETFSIR
KNITANNEDISTNNLVNTLTFFSKILPDISNISLHKEVITNVIKYIIELRGVRSDVVLDTLINEICENINLDKNIFSLEF
EDHHFDEYDADGGVLVEKNKQTVTNIDSQNLKTATYDESNAGFDSISVMIGENECLVTKSSM

Sequences:

>Translated_222_residues
MSGNKNLLAVDAAKFTLKNSGKYFYFKSNKSDEDNHMFIIGNSGNSIHTKLDLETYNMFKAMLNNDYCMDLETFETFSIR
KNITANNEDISTNNLVNTLTFFSKILPDISNISLHKEVITNVIKYIIELRGVRSDVVLDTLINEICENINLDKNIFSLEF
EDHHFDEYDADGGVLVEKNKQTVTNIDSQNLKTATYDESNAGFDSISVMIGENECLVTKSSM
>Mature_221_residues
SGNKNLLAVDAAKFTLKNSGKYFYFKSNKSDEDNHMFIIGNSGNSIHTKLDLETYNMFKAMLNNDYCMDLETFETFSIRK
NITANNEDISTNNLVNTLTFFSKILPDISNISLHKEVITNVIKYIIELRGVRSDVVLDTLINEICENINLDKNIFSLEFE
DHHFDEYDADGGVLVEKNKQTVTNIDSQNLKTATYDESNAGFDSISVMIGENECLVTKSSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25163; Mature: 25032

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNKNLLAVDAAKFTLKNSGKYFYFKSNKSDEDNHMFIIGNSGNSIHTKLDLETYNMFK
CCCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHH
AMLNNDYCMDLETFETFSIRKNITANNEDISTNNLVNTLTFFSKILPDISNISLHKEVIT
HHHCCCEEEEHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NVIKYIIELRGVRSDVVLDTLINEICENINLDKNIFSLEFEDHHFDEYDADGGVLVEKNK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCC
QTVTNIDSQNLKTATYDESNAGFDSISVMIGENECLVTKSSM
CCEECCCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
SGNKNLLAVDAAKFTLKNSGKYFYFKSNKSDEDNHMFIIGNSGNSIHTKLDLETYNMFK
CCCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEEEEHHHHHHHH
AMLNNDYCMDLETFETFSIRKNITANNEDISTNNLVNTLTFFSKILPDISNISLHKEVIT
HHHCCCEEEEHHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
NVIKYIIELRGVRSDVVLDTLINEICENINLDKNIFSLEFEDHHFDEYDADGGVLVEKNK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCC
QTVTNIDSQNLKTATYDESNAGFDSISVMIGENECLVTKSSM
CCEECCCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA