Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184422

Identifier: 189184422

GI number: 189184422

Start: 1545218

End: 1546111

Strand: Direct

Name: 189184422

Synonym: OTT_1515

Alternate gene names: NA

Gene position: 1545218-1546111 (Clockwise)

Preceding gene: 189184421

Following gene: 189184428

Centisome position: 76.92

GC content: 28.19

Gene sequence:

>894_bases
ATGATTATTCGAATTATCTTACTTTTAGTAAGCATTTTAACAATTAAAGTACAAGCTTTTCCAGTTTATAATACAAGTAA
TATTAGCGCTTTTAAAGAGCTGATAACTTCTGGAGAAAATACTATTCAACTCTTGCTGACAACAATTACTGCAACATCTA
ATACAAAATTTCACAAGCTTAAAGAAATATATAGTAAACAGAATTTAAATAGATCATTTGTTAATAAGTTGAATAAAAAC
TATCTTGAAGACCAAGGAACACAGTTACTAGTGTTACTACATGGCCTAAGTAAAACTAGTAAATCTTTAAGAGGAATGGA
GAAATTTTCTTACAAACAAGGATTCAAAGTATTAAACATTGATTATCCATCTACTAAGTTTCCAATAGAGCATCTAGTAG
ATATAATCCATGATAAAATTACTCTCAGCCTTCAACAGCAAAAATATACAAGCATTTCATTTGTTGGAGTTTCTATGGGA
GGTCTAGTCATAAGAGCTTATTTACACAAGTATAAAATACCTAATTTAGGAAAAGTAGTATTAATAGGCACACCTAATAA
AGGAAGTGAAGTAGCAGATTATCTAAAAAATAATAAACTTTATAAAAAATTTACCGGTCCTGCTGGTCAACAATTAATCA
CTAATCAAAAAGAATTTAATAATATTTTTGGCGATATATATTACGAGTGTGGAGTAATATCAGGTAATCTACCACTGGAT
CTTTGTTGTATATTTATGAAAGGAAAACCAAGCGATGGTAAAGTAACTATAGAAAGCACTAAAATTGAAGGCATGCAAGA
CCATATAGTACTAAAAATTCCTCATTGGTATTTAGAAAAGAGTAAAAAAGTGTGGCTTTATACTTTATATTTTCTTAAAT
ATTCAAAATTTTGA

Upstream 100 bases:

>100_bases
GATTTTGTTTGATTAATAATTAAAAATAGCTCTACCAACTGAAAATTTTCATTAATTTGCAATTTTCTAAAAAATAACCT
AAAAGTTATAGAAAATAATA

Downstream 100 bases:

>100_bases
AAATCAATTAAGATTTCTGCGCAAACTTAACTTTATATTGAATATCAAGTAGGCTTTGCTTTAAGGAGTTGCTATCATTA
CCTAACATAGCTGCACGATT

Product: putative lipase LipB

Products: NA

Alternate protein names: Acetyltransferase Or Hydrolase; PGAP1 Family Protein; Pgap1 Family Protein; Alpha/Beta Hydrolase; Triacylglycerol Lipase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Superfamily Hydrolase/Acyltransferase; Alpha/Beta Family Hydrolase; Lipase LipB

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN
YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG
GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD
LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF

Sequences:

>Translated_297_residues
MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN
YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG
GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD
LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
>Mature_297_residues
MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKLKEIYSKQNLNRSFVNKLNKN
YLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNIDYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMG
GLVIRAYLHKYKIPNLGKVVLIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD
LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33879; Mature: 33879

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL
CHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH
KEIYSKQNLNRSFVNKLNKNYLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNI
HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE
DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV
CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEE
LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD
EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHEEEEEEECCCCCE
LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC
>Mature Secondary Structure
MIIRIILLLVSILTIKVQAFPVYNTSNISAFKELITSGENTIQLLLTTITATSNTKFHKL
CHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHH
KEIYSKQNLNRSFVNKLNKNYLEDQGTQLLVLLHGLSKTSKSLRGMEKFSYKQGFKVLNI
HHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE
DYPSTKFPIEHLVDIIHDKITLSLQQQKYTSISFVGVSMGGLVIRAYLHKYKIPNLGKVV
CCCCCCCCHHHHHHHHHHHHEEEEHHCCCCEEEEEEECHHHHHHHHHHHHCCCCCCCEEE
LIGTPNKGSEVADYLKNNKLYKKFTGPAGQQLITNQKEFNNIFGDIYYECGVISGNLPLD
EEECCCCCHHHHHHHHCCCEEEECCCCCCHHHHCCHHHHHHHHHHHHEEEEEEECCCCCE
LCCIFMKGKPSDGKVTIESTKIEGMQDHIVLKIPHWYLEKSKKVWLYTLYFLKYSKF
EEEEEEECCCCCCEEEEEEEECCCCCCCEEEEECHHHHCCCCCEEEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA