Click here to switch to the map view.

The map label for this gene is 189184432

Identifier: 189184432

GI number: 189184432

Start: 1554140

End: 1554604

Strand: Direct

Name: 189184432

Synonym: OTT_1525

Alternate gene names: NA

Gene position: 1554140-1554604 (Clockwise)

Preceding gene: 189184428

Following gene: 189184437

Centisome position: 77.36

GC content: 34.84

Gene sequence:

>465_bases
ATGGCAAATCTTATGCAGCAAAAAATTACTCTTCAACAAAAAAAGGCTAGGCTAATCATGGATGAGGTTAACCTTAAAAT
TAAAGAACGTAAAATGCGTACTCGACGTCTTATCGAAATGGGTGGATTAGTTGCTAAAGCTAAGCTTGATCACTTATCAA
CAAATACTTTATTCGGTGCGATTATTTCACTAAAAGAAACTTTAACACAACATCCAAATGTTCAGGATCATTGGACTACA
ATAGGTAAAGATATTTTTGATAAAGAACAGCAAAATAAAGCTGCTGTGATTTTAAAATTTGCCTCTGAACCGAATGAAGA
CACTAAGTGCTACATTCGCCTTCATGGCTTAAAATGGAATAGCTTTCGTCAAGAATGGTGCGACTATGTTAAGGACATTG
AGGCCTTAAAGAATGGCCTTCTCAATGTTCAGTACAAACTTGATATCATAAAGCCAATATCCTAA

Upstream 100 bases:

>100_bases
ATTATTTGATGTTGGTTTGGTAGGCGCGGTTTTTTTTCTTTACTGGAATTGTATTTTGATATATTCTTGCCTGATTTTTT
TATCTTTCTGAATTACTAAC

Downstream 100 bases:

>100_bases
GAGCTAGCAATATTCTTTATCAGCAAAAGTACTATAATTTTCACCTAATGGAATATTTATTTCAGACATATTATCTGTAG
CTTTTGCTATACTAGAAACA

Product: putative conjugative transfer protein TraD

Products: NA

Alternate protein names: Conjugal Transfer Protein TraD; Conjugative Transfer Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MANLMQQKITLQQKKARLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSTNTLFGAIISLKETLTQHPNVQDHWTT
IGKDIFDKEQQNKAAVILKFASEPNEDTKCYIRLHGLKWNSFRQEWCDYVKDIEALKNGLLNVQYKLDIIKPIS

Sequences:

>Translated_154_residues
MANLMQQKITLQQKKARLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSTNTLFGAIISLKETLTQHPNVQDHWTT
IGKDIFDKEQQNKAAVILKFASEPNEDTKCYIRLHGLKWNSFRQEWCDYVKDIEALKNGLLNVQYKLDIIKPIS
>Mature_153_residues
ANLMQQKITLQQKKARLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSTNTLFGAIISLKETLTQHPNVQDHWTTI
GKDIFDKEQQNKAAVILKFASEPNEDTKCYIRLHGLKWNSFRQEWCDYVKDIEALKNGLLNVQYKLDIIKPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17935; Mature: 17804

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLMQQKITLQQKKARLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSTNTLFGA
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
IISLKETLTQHPNVQDHWTTIGKDIFDKEQQNKAAVILKFASEPNEDTKCYIRLHGLKWN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCH
SFRQEWCDYVKDIEALKNGLLNVQYKLDIIKPIS
HHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC
>Mature Secondary Structure 
ANLMQQKITLQQKKARLIMDEVNLKIKERKMRTRRLIEMGGLVAKAKLDHLSTNTLFGA
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHH
IISLKETLTQHPNVQDHWTTIGKDIFDKEQQNKAAVILKFASEPNEDTKCYIRLHGLKWN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECCCCH
SFRQEWCDYVKDIEALKNGLLNVQYKLDIIKPIS
HHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA