| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184344
Identifier: 189184344
GI number: 189184344
Start: 1468288
End: 1468695
Strand: Direct
Name: 189184344
Synonym: OTT_1437
Alternate gene names: NA
Gene position: 1468288-1468695 (Clockwise)
Preceding gene: 189184343
Following gene: 189184345
Centisome position: 73.09
GC content: 33.82
Gene sequence:
>408_bases GTGATATACAGTCACAAAGCGGGTTTGATTATTTTGCTGCTGGTAAAAGATGTAGTACAGAATATACCTAATAATTTCGG TATTTATTATCGCAAGCCTAGTAATTTAGCCATTAGTTTCAAAACCTGCAGACAAGCTACTACATTGATTAAAGCAGCAA TTCATAAAGAATTAAATGAAGGACTTTTAACGAAGTTTGCAGCAGCGATTGGAGTTCAATCTGATCAGTCAAACATGTTA AGTCAAAGACTAAAAGTCATGATTAAAGACACACTAAAATATCTACAAAGAGAACAACAAGATATTCATGAATGGATGAA GCAAGCTATGCTTCTAATGCTAATCGTAAGTCATATGATGACTGGCGTGAGAAGTTTTCATTATCACGAATTTATCCTAA TCTGGTGA
Upstream 100 bases:
>100_bases ATGGAGATGAATCAATTTTCTAAAGGAGATTGTGAATTAACAAAAGCGTTATTTGCTACAGCTTTACCAAGGAACTCAGC TATGAGAGAAGCTGTTTGCC
Downstream 100 bases:
>100_bases GTATGCATGCAATTAGAGTGCTATTTCAACAATCATTTTCGTATCTAGTCGTTGGAGAAATGCCTGCTCACATGATGCCT ATTTTACAATCTGTTTTTTT
Product: putative conjugative transfer protein TraG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MIYSHKAGLIILLLVKDVVQNIPNNFGIYYRKPSNLAISFKTCRQATTLIKAAIHKELNEGLLTKFAAAIGVQSDQSNML SQRLKVMIKDTLKYLQREQQDIHEWMKQAMLLMLIVSHMMTGVRSFHYHEFILIW
Sequences:
>Translated_135_residues MIYSHKAGLIILLLVKDVVQNIPNNFGIYYRKPSNLAISFKTCRQATTLIKAAIHKELNEGLLTKFAAAIGVQSDQSNML SQRLKVMIKDTLKYLQREQQDIHEWMKQAMLLMLIVSHMMTGVRSFHYHEFILIW >Mature_135_residues MIYSHKAGLIILLLVKDVVQNIPNNFGIYYRKPSNLAISFKTCRQATTLIKAAIHKELNEGLLTKFAAAIGVQSDQSNML SQRLKVMIKDTLKYLQREQQDIHEWMKQAMLLMLIVSHMMTGVRSFHYHEFILIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15677; Mature: 15677
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSHKAGLIILLLVKDVVQNIPNNFGIYYRKPSNLAISFKTCRQATTLIKAAIHKELNE CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH GLLTKFAAAIGVQSDQSNMLSQRLKVMIKDTLKYLQREQQDIHEWMKQAMLLMLIVSHMM HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVRSFHYHEFILIW HHHHHHHHHEEEEEC >Mature Secondary Structure MIYSHKAGLIILLLVKDVVQNIPNNFGIYYRKPSNLAISFKTCRQATTLIKAAIHKELNE CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH GLLTKFAAAIGVQSDQSNMLSQRLKVMIKDTLKYLQREQQDIHEWMKQAMLLMLIVSHMM HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGVRSFHYHEFILIW HHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA