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The map label for this gene is traH [C]

Identifier: 189184343

GI number: 189184343

Start: 1468005

End: 1468358

Strand: Direct

Name: traH [C]

Synonym: OTT_1436

Alternate gene names: 189184343

Gene position: 1468005-1468358 (Clockwise)

Preceding gene: 189184342

Following gene: 189184344

Centisome position: 73.07

GC content: 33.9

Gene sequence:

>354_bases
ATGGAATTTGCAAGAGAAGAAATAGAGGAGAATCATAGTAGCTTCTCTGTTATTTCTGGAGAAGAATTAGTTCAATTAAT
GAAGAATATTAGTTCTCAGGCAAAAGTTTATGCATTTTCATTAGGATTAAAAACTTTTGCTCCTCAAATTGAGAATGCCA
TCAAAGATTTGCGTAATCTAGCAATGGAGATGAATCAATTTTCTAAAGGAGATTGTGAATTAACAAAAGCGTTATTTGCT
ACAGCTTTACCAAGGAACTCAGCTATGAGAGAAGCTGTTTGCCGTGATATACAGTCACAAAGCGGGTTTGATTATTTTGC
TGCTGGTAAAAGATGTAGTACAGAATATACCTAA

Upstream 100 bases:

>100_bases
AAGTTGTACTGAAGGCAGTAATTTTAACATTGAACTTATTCGAGAGTTAAATGTTGAGTGCAGATTAGAGGATCTATGGC
TTCCATGGCAAAAATGACAA

Downstream 100 bases:

>100_bases
TAATTTCGGTATTTATTATCGCAAGCCTAGTAATTTAGCCATTAGTTTCAAAACCTGCAGACAAGCTACTACATTGATTA
AAGCAGCAATTCATAAAGAA

Product: putative conjugative transfer protein TraH

Products: NA

Alternate protein names: F Pilus Assembly Protein TraH

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MEFAREEIEENHSSFSVISGEELVQLMKNISSQAKVYAFSLGLKTFAPQIENAIKDLRNLAMEMNQFSKGDCELTKALFA
TALPRNSAMREAVCRDIQSQSGFDYFAAGKRCSTEYT

Sequences:

>Translated_117_residues
MEFAREEIEENHSSFSVISGEELVQLMKNISSQAKVYAFSLGLKTFAPQIENAIKDLRNLAMEMNQFSKGDCELTKALFA
TALPRNSAMREAVCRDIQSQSGFDYFAAGKRCSTEYT
>Mature_117_residues
MEFAREEIEENHSSFSVISGEELVQLMKNISSQAKVYAFSLGLKTFAPQIENAIKDLRNLAMEMNQFSKGDCELTKALFA
TALPRNSAMREAVCRDIQSQSGFDYFAAGKRCSTEYT

Specific function: Involved In Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13133; Mature: 13133

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAREEIEENHSSFSVISGEELVQLMKNISSQAKVYAFSLGLKTFAPQIENAIKDLRNL
CCHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMEMNQFSKGDCELTKALFATALPRNSAMREAVCRDIQSQSGFDYFAAGKRCSTEYT
HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MEFAREEIEENHSSFSVISGEELVQLMKNISSQAKVYAFSLGLKTFAPQIENAIKDLRNL
CCHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMEMNQFSKGDCELTKALFATALPRNSAMREAVCRDIQSQSGFDYFAAGKRCSTEYT
HHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA