| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
Click here to switch to the map view.
The map label for this gene is 189183884
Identifier: 189183884
GI number: 189183884
Start: 1026884
End: 1027078
Strand: Direct
Name: 189183884
Synonym: OTT_0977
Alternate gene names: NA
Gene position: 1026884-1027078 (Clockwise)
Preceding gene: 189183883
Following gene: 189183886
Centisome position: 51.11
GC content: 33.33
Gene sequence:
>195_bases ATGAAATTCGATCAGATTAAAGAGTTAGAGGATGAAAAATTTCGTCGATTAACAGGAGTAAGGAATGGAATATTTTCAAA GATGGTAGATATTTTGAGGAAAGCTGATGTTCTTAAGAAATCAAAAGGATGGCGTAAAAATAAGCTCAATTTGGAGGAAC AGTTGCTGATGGTCTTAGAATACCTTAGAGAATAG
Upstream 100 bases:
>100_bases TAATTTCTAACCAGCAAAATTGTTTAGTGGTACAATAGACTTCTTTCGAAACTGAACAATTATGTAGAATGATGTTATAA ATATGTGATTTGAGGTAATA
Downstream 100 bases:
>100_bases CATACTTATTTCCATATAGGTCAGAACTATGGGATTAGTGAAAGTTCAGCATATAAAGCTGAATGTGTAGAAGGTACCCT AGTTAAACACCCAAACTTTG
Product: transposase
Products: NA
Alternate protein names: Preprotein Translocase SecY; ISRin1 Transposase OrfA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKFDQIKELEDEKFRRLTGVRNGIFSKMVDILRKADVLKKSKGWRKNKLNLEEQLLMVLEYLRE
Sequences:
>Translated_64_residues MKFDQIKELEDEKFRRLTGVRNGIFSKMVDILRKADVLKKSKGWRKNKLNLEEQLLMVLEYLRE >Mature_64_residues MKFDQIKELEDEKFRRLTGVRNGIFSKMVDILRKADVLKKSKGWRKNKLNLEEQLLMVLEYLRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7769; Mature: 7769
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDQIKELEDEKFRRLTGVRNGIFSKMVDILRKADVLKKSKGWRKNKLNLEEQLLMVLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YLRE HHHC >Mature Secondary Structure MKFDQIKELEDEKFRRLTGVRNGIFSKMVDILRKADVLKKSKGWRKNKLNLEEQLLMVLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YLRE HHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA