| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183883
Identifier: 189183883
GI number: 189183883
Start: 1026090
End: 1026821
Strand: Direct
Name: 189183883
Synonym: OTT_0976
Alternate gene names: NA
Gene position: 1026090-1026821 (Clockwise)
Preceding gene: 189183882
Following gene: 189183884
Centisome position: 51.07
GC content: 27.19
Gene sequence:
>732_bases ATGCTTATAAAACGGTTTATATCTTATTTAGCAATAAATAATAAAGTTACTTATGGTCAATATTTTGCATATGTTATTTT AATGCTACTAATACTTCTTATAGAACTTTTATGTTTATACTATGTCGTTTTTTATTATCTATCTGTAGATATTCCAATAA TAGAAAATGATAACCTTCCACATAAAATTAAGCCAAAGGTTGTTGGTGGAGTCAAGATATTAAACTCTGATAAAACTATA TATGATAAAATAAAAAATGATGGTACTAGTGCAAATAATCAAGTTAAAATTTTACCTTTACCAGAGCAACCTTTAAAAAT TAGAAAAAATGATGATGGCATCGTAAAAAAAGAGTCGCAGGAATCAAATAGCATAACTGATTCTTGTGCATACTCACAGC AAGATTTGGAAATTATAACATTAGAGCAGTTTGATAATAGATTAAAATATTTGCTTTTGCATTCTCCAGCAAAAAAACGC ACAACACAGAAATATAGGTTATATCTTGATTCTAGTTATAATGCTGATCTTGCAGAAGCAGCGTGGCAACAAATTTTTGA AAGTAATAGTAAGATATTAAAAGGCTATAATTATATCATAGATGCAATGGTTGTTGATAATGATAAAGTGATATACAATA TTTTGGCTGGTGAATTCTCTAATTTTAGTAGTGCATTTGCATTATGTAAAAAATTAATTTCTAACCAGCAAAATTGTTTA GTGGTACAATAG
Upstream 100 bases:
>100_bases CCGCTCGTCTTGCATTAGCTACAGCCGTTAGAGAGATTATTAGAGAAGGATTAAAGATTATTGGAATTACTTGTGTTGAA GTAATGTAAGAATCACAACT
Downstream 100 bases:
>100_bases ACTTCTTTCGAAACTGAACAATTATGTAGAATGATGTTATAAATATGTGATTTGAGGTAATAATGAAATTCGATCAGATT AAAGAGTTAGAGGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL VVQ
Sequences:
>Translated_243_residues MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL VVQ >Mature_243_residues MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLPHKIKPKVVGGVKILNSDKTI YDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKR TTQKYRLYLDSSYNADLAEAAWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL VVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 27919; Mature: 27919
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLP CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC HKIKPKVVGGVKILNSDKTIYDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQ CCCCCCEECCEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCC ESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKRTTQKYRLYLDSSYNADLAEA CCCCCHHHHHCCCCCCEEEEHHHHHCHHEEEEEECCHHHHCCEEEEEEECCCCCCHHHHH AWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL HHHHHHHCCCHHHHHHHEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEE VVQ EEC >Mature Secondary Structure MLIKRFISYLAINNKVTYGQYFAYVILMLLILLIELLCLYYVVFYYLSVDIPIIENDNLP CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC HKIKPKVVGGVKILNSDKTIYDKIKNDGTSANNQVKILPLPEQPLKIRKNDDGIVKKESQ CCCCCCEECCEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCEECCCC ESNSITDSCAYSQQDLEIITLEQFDNRLKYLLLHSPAKKRTTQKYRLYLDSSYNADLAEA CCCCCHHHHHCCCCCCEEEEHHHHHCHHEEEEEECCHHHHCCEEEEEEECCCCCCHHHHH AWQQIFESNSKILKGYNYIIDAMVVDNDKVIYNILAGEFSNFSSAFALCKKLISNQQNCL HHHHHHHCCCHHHHHHHEEEEEEEECCCCEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEE VVQ EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]