| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183886
Identifier: 189183886
GI number: 189183886
Start: 1028515
End: 1030044
Strand: Direct
Name: 189183886
Synonym: OTT_0979
Alternate gene names: NA
Gene position: 1028515-1030044 (Clockwise)
Preceding gene: 189183884
Following gene: 189183887
Centisome position: 51.2
GC content: 30.33
Gene sequence:
>1530_bases ATGGTATATAGACTACAAATCTATTACAACAAAGATATAGATGAATTACAGGAAAGTTATTACTTTTTTGAAAAGGAGTT AAACCTTCGTTACCGCAGAGTTAGGCAATGCTTGGTTGAATTAAGAGATGCAGGTTTTATTGAAGTTGAAAATAGGACAA TAATTAAAGACAGCTTTAAGTTGCGTAATGTTCCATGTATAAAACTTCTAAAAAATTTTCAGCGTTTCACTGAAAAAGAA ACAAAAGGAGAAAAAATTATTGATCTAACCCAAAAAATTTTTCGCTCCAACCTGAAAGAAATTTCAGGTGAACCTGAAAA AAGTTTCAGGTACATATATAGATATAATAATAATAAAAAAAATAATAATAGATCTAGATCTACTGAAGATAAGTTAGTAG AGAATGATCAAAATAAAAATGAAGATCAACAGCAAAATTTGAAGTTTAAATATACGGAATCTGATGATTTTATAGAAATT GAGTTAGTAGAAAATGAAAAAGAACATCAACAACAGAATTTGAATTTCTATGAGCTTAGTAATTTTAGCAATAAAAAGCC ATTAAACAAGGATTATGAGCAAAATAGCGAGTTATCAACTCCAGCTATTACTAAGGATTCAGAGGTTGAAAAGAATGAAT GCTGCCCCAAAAGAAAAAGACTAGCAGATTATTATCCACTAACGCCAGAAGATGCAGTTATACTGCAACGTATGTCTAGT AGAAGCTTCAACATATACTTCATAAATCAATTACTGTTGAAGTTATCAAATAAATATCCAAACCGTCATTTTGAAAATAA GACAGCAGTGCTAAACTATATGGCAAAAGCGTTAGCAAATGAATTACTAACTACTGATCAGGCTAATAGTGAAAATTTTA GATTTAATGATGTAGGAAGATTTAAAGAACAGTATCTAGCAAATATTGAATCTGGTACAGATCGTAGTATGAAGGCTCAG TTGAAGCGTAAAATAGCTGGAGTCTTTGAAGCAGATATGGCTTATCAAATTTTGACCTCTTATGATTTTGGAGCAGCGGT TAAAAACAAATATTACATCAAGCTGATTAAGAATATTACACTGTCAGATCATATTAAATTCAAGATACTACAGGAGGTAC GAGCTGTATATGGCAACGATATTGAGCAGTTACAAGTTATACCATTTGACGAATCAAAACAAGTTGCCAATAGCACAACT GAGTATCAAAAAACAACAGTTTTACAGCAACAAATAAGTGATGAAGATTACCTTTCAGAACTTAGTAAAGAGCTAGGCTC CAACTCAACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGTTATGGTCAAGCTATCGATAAATCATGGTTTAGTTCAT TAAAAGTTGTAAATGAAGATAGTGTTAATAAAAAAATATTCATCAAAGCAAAAACAGAATTTGAAGATAGTTACATCAGA GAGAACTATCTGAAAGATCTTGAGTCCGCTTTTAAAGCTCAAGGATTTTCTTTTGAGTTAGTTAAGTTTAGTAATTTTAA TAAAATTTAA
Upstream 100 bases:
>100_bases TTATAACTTTATTGGAAATATCATTCCACCAGAATGGAGAAAGCTAAGTGGAGATAATGGAAAAGCATTAAGTAAAACAT CTAAACAGCTTTTATCATTG
Downstream 100 bases:
>100_bases AGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGATACTTGGAGCAATTCTG ATTAACAATCGTGCGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MVYRLQIYYNKDIDELQESYYFFEKELNLRYRRVRQCLVELRDAGFIEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKE TKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEI ELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGRFKEQYLANIESGTDRSMKAQ LKRKIAGVFEADMAYQILTSYDFGAAVKNKYYIKLIKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTT EYQKTTVLQQQISDEDYLSELSKELGSNSTWYKVRESLIKSYGQAIDKSWFSSLKVVNEDSVNKKIFIKAKTEFEDSYIR ENYLKDLESAFKAQGFSFELVKFSNFNKI
Sequences:
>Translated_509_residues MVYRLQIYYNKDIDELQESYYFFEKELNLRYRRVRQCLVELRDAGFIEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKE TKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEI ELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGRFKEQYLANIESGTDRSMKAQ LKRKIAGVFEADMAYQILTSYDFGAAVKNKYYIKLIKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTT EYQKTTVLQQQISDEDYLSELSKELGSNSTWYKVRESLIKSYGQAIDKSWFSSLKVVNEDSVNKKIFIKAKTEFEDSYIR ENYLKDLESAFKAQGFSFELVKFSNFNKI >Mature_509_residues MVYRLQIYYNKDIDELQESYYFFEKELNLRYRRVRQCLVELRDAGFIEVENRTIIKDSFKLRNVPCIKLLKNFQRFTEKE TKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKKNNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEI ELVENEKEHQQQNLNFYELSNFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGRFKEQYLANIESGTDRSMKAQ LKRKIAGVFEADMAYQILTSYDFGAAVKNKYYIKLIKNITLSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTT EYQKTTVLQQQISDEDYLSELSKELGSNSTWYKVRESLIKSYGQAIDKSWFSSLKVVNEDSVNKKIFIKAKTEFEDSYIR ENYLKDLESAFKAQGFSFELVKFSNFNKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60333; Mature: 60333
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYRLQIYYNKDIDELQESYYFFEKELNLRYRRVRQCLVELRDAGFIEVENRTIIKDSFK CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCH LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELS CCCCCCCHHHHHHHCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCHHHHHHCCCEEEEC NFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR CCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH FKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQILTSYDFGAAVKNKYYIKLIKNIT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEEHHHHCCC LSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYLSE CCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHH LSKELGSNSTWYKVRESLIKSYGQAIDKSWFSSLKVVNEDSVNKKIFIKAKTEFEDSYIR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH ENYLKDLESAFKAQGFSFELVKFSNFNKI HHHHHHHHHHHHHCCCEEEEEEECCCCCC >Mature Secondary Structure MVYRLQIYYNKDIDELQESYYFFEKELNLRYRRVRQCLVELRDAGFIEVENRTIIKDSFK CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCH LRNVPCIKLLKNFQRFTEKETKGEKIIDLTQKIFRSNLKEISGEPEKSFRYIYRYNNNKK HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCC NNNRSRSTEDKLVENDQNKNEDQQQNLKFKYTESDDFIEIELVENEKEHQQQNLNFYELS CCCCCCCHHHHHHHCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCHHHHHHCCCEEEEC NFSNKKPLNKDYEQNSELSTPAITKDSEVEKNECCPKRKRLADYYPLTPEDAVILQRMSS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCCHHHHHHHHHC RSFNIYFINQLLLKLSNKYPNRHFENKTAVLNYMAKALANELLTTDQANSENFRFNDVGR CCEEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH FKEQYLANIESGTDRSMKAQLKRKIAGVFEADMAYQILTSYDFGAAVKNKYYIKLIKNIT HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHEEHHHHCCC LSDHIKFKILQEVRAVYGNDIEQLQVIPFDESKQVANSTTEYQKTTVLQQQISDEDYLSE CCHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHH LSKELGSNSTWYKVRESLIKSYGQAIDKSWFSSLKVVNEDSVNKKIFIKAKTEFEDSYIR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHH ENYLKDLESAFKAQGFSFELVKFSNFNKI HHHHHHHHHHHHHCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA