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The map label for this gene is glyQ [H]

Identifier: 189183851

GI number: 189183851

Start: 987094

End: 987972

Strand: Reverse

Name: glyQ [H]

Synonym: OTT_0944

Alternate gene names: 189183851

Gene position: 987972-987094 (Counterclockwise)

Preceding gene: 189183859

Following gene: 189183850

Centisome position: 49.18

GC content: 36.06

Gene sequence:

>879_bases
ATGAACAAGCTTTCTTTTCAACAAATAATAATGCACCTACAGCAATTCTGGAGCAATCAAGGCTGCGCTATATTACAGCC
ATACGATGTTGAAATTGGCGCAGGCACTTTTCATCCTGCAACAGCAATAAAATTGCTAGGACAAGCCCAATGGCGTGCAG
CATATGTTCAGCCATCCAGGCGACCAACAGATAGTAGATATGGCAGCCACCCTAATCGTTTACAGCAATACTATCAGTTT
CAAGTCATAATTAAGCCATCTCCAGATAATATTCAAGCCCTTTACTTACATAGCTTAGAATATCTCAACATAAATACTCA
AACTAATGATATTAGATTTGTAGAAGATGACTGGCAATCCCCTACTCTAGGAGCTTCAGGCTTAGGCTGGGAAGTATGGT
GCAATGGAATGGAAATTTCTCAGATTACTTACTTACAACAAATAGCTAGCATAGAATGCAATCCAATACCTATAGAAATC
ACTTATGGACTTGAACGATTAGCAATGTACATACAGGAAGTCGATGATATTAAACTACTAAATTGGAATAATCAATCAGG
AGAGCTAGCTTTAACATATCAAATGGTTAACATAGAGAATGAACGGCAATTTTCTGCTTATAACCTTGAATACGCCAACA
CAAATATATTGTTTAAACAATTTGAAGAAGCTGAACAACAATGCCAAGATTTAGTCAAGCAAAATCTGCCTCTACCAGCA
TATGATTTCTGTTTAAAAGCTAGCCACTTATTTAATCTACTTGATAGCAGAGGAGTAATCGGAGTTACTCAACGCACTAA
TTATATCGCTAGAATACGAACACTAGCTCAAACAGTATGTAATCAATATATAAAAAATCTTAATATATCAAATGCATAG

Upstream 100 bases:

>100_bases
TGTCTTAATTATATTTTATATAAAATCTTAAATCAAGATACATTAATTAACCACATAATTATACTAACATTGTATTATCT
AAAATTAGCCCACATAAAAA

Downstream 100 bases:

>100_bases
TTACAGTTTAATATTAGAACTCTACTCTGAGGAAATTCCAGCTAAAATGCAAAAAAAAGCTGAATTAGCATTTCAAGAAA
TTTTTACTAAAAATTTCAAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNKLSFQQIIMHLQQFWSNQGCAILQPYDVEIGAGTFHPATAIKLLGQAQWRAAYVQPSRRPTDSRYGSHPNRLQQYYQF
QVIIKPSPDNIQALYLHSLEYLNINTQTNDIRFVEDDWQSPTLGASGLGWEVWCNGMEISQITYLQQIASIECNPIPIEI
TYGLERLAMYIQEVDDIKLLNWNNQSGELALTYQMVNIENERQFSAYNLEYANTNILFKQFEEAEQQCQDLVKQNLPLPA
YDFCLKASHLFNLLDSRGVIGVTQRTNYIARIRTLAQTVCNQYIKNLNISNA

Sequences:

>Translated_292_residues
MNKLSFQQIIMHLQQFWSNQGCAILQPYDVEIGAGTFHPATAIKLLGQAQWRAAYVQPSRRPTDSRYGSHPNRLQQYYQF
QVIIKPSPDNIQALYLHSLEYLNINTQTNDIRFVEDDWQSPTLGASGLGWEVWCNGMEISQITYLQQIASIECNPIPIEI
TYGLERLAMYIQEVDDIKLLNWNNQSGELALTYQMVNIENERQFSAYNLEYANTNILFKQFEEAEQQCQDLVKQNLPLPA
YDFCLKASHLFNLLDSRGVIGVTQRTNYIARIRTLAQTVCNQYIKNLNISNA
>Mature_292_residues
MNKLSFQQIIMHLQQFWSNQGCAILQPYDVEIGAGTFHPATAIKLLGQAQWRAAYVQPSRRPTDSRYGSHPNRLQQYYQF
QVIIKPSPDNIQALYLHSLEYLNINTQTNDIRFVEDDWQSPTLGASGLGWEVWCNGMEISQITYLQQIASIECNPIPIEI
TYGLERLAMYIQEVDDIKLLNWNNQSGELALTYQMVNIENERQFSAYNLEYANTNILFKQFEEAEQQCQDLVKQNLPLPA
YDFCLKASHLFNLLDSRGVIGVTQRTNYIARIRTLAQTVCNQYIKNLNISNA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=282, Percent_Identity=57.8014184397163, Blast_Score=333, Evalue=9e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 33686; Mature: 33686

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLSFQQIIMHLQQFWSNQGCAILQPYDVEIGAGTFHPATAIKLLGQAQWRAAYVQPSR
CCCCCHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC
RPTDSRYGSHPNRLQQYYQFQVIIKPSPDNIQALYLHSLEYLNINTQTNDIRFVEDDWQS
CCCCCCCCCCHHHHHHEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCC
PTLGASGLGWEVWCNGMEISQITYLQQIASIECNPIPIEITYGLERLAMYIQEVDDIKLL
CCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEE
NWNNQSGELALTYQMVNIENERQFSAYNLEYANTNILFKQFEEAEQQCQDLVKQNLPLPA
ECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCH
YDFCLKASHLFNLLDSRGVIGVTQRTNYIARIRTLAQTVCNQYIKNLNISNA
HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKLSFQQIIMHLQQFWSNQGCAILQPYDVEIGAGTFHPATAIKLLGQAQWRAAYVQPSR
CCCCCHHHHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC
RPTDSRYGSHPNRLQQYYQFQVIIKPSPDNIQALYLHSLEYLNINTQTNDIRFVEDDWQS
CCCCCCCCCCHHHHHHEEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCC
PTLGASGLGWEVWCNGMEISQITYLQQIASIECNPIPIEITYGLERLAMYIQEVDDIKLL
CCCCCCCCCHHEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCEEEE
NWNNQSGELALTYQMVNIENERQFSAYNLEYANTNILFKQFEEAEQQCQDLVKQNLPLPA
ECCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCH
YDFCLKASHLFNLLDSRGVIGVTQRTNYIARIRTLAQTVCNQYIKNLNISNA
HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA