| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183859
Identifier: 189183859
GI number: 189183859
Start: 996667
End: 996996
Strand: Reverse
Name: 189183859
Synonym: OTT_0952
Alternate gene names: NA
Gene position: 996996-996667 (Counterclockwise)
Preceding gene: 189183863
Following gene: 189183851
Centisome position: 49.63
GC content: 28.18
Gene sequence:
>330_bases TTGTTTGGTGATAAATCTTACATATCTAAAGACTTATTTCATCAACTGTTGGCCAATGGTCTACGTTTATTTACTAATCT TCGTAAAGATATGAAAACATATTTATTGGACATAGATGACAAGCATTTATTAAATAAACATTCCTTAATTCAAGATGTCT TTAATGTACTAAAAAAACATATCCATTTAGAGCATACTAGACATTACTCTCTTATTAATTTCTTTGTTCATATAATTGCT TCTCTTGCAACTTTTCTATCTCAAAACTCAATTCCTATCTTGTTTCCTCATCTTTTTCTTCACTCAACTTATCCTAATCT AGCGTTATGA
Upstream 100 bases:
>100_bases CTGCCATAGAAGACAAATGTTCCCTATAGATAATGTTATAATTAATAATAAAAGCAACATATCTGTAGCTTAAGTTATTT CTAAAGGCTTATTTGGTAAA
Downstream 100 bases:
>100_bases TGCTAGAAAACTTAAGTACTGTTATAGTAGTTTAGCTATCTATGCGAGAAAAAAGATAACCTAGAAACCAAAAGCTTTTG TAGCTTGTTCCATTATATTA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative; ISPg3 Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family Protein
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MFGDKSYISKDLFHQLLANGLRLFTNLRKDMKTYLLDIDDKHLLNKHSLIQDVFNVLKKHIHLEHTRHYSLINFFVHIIA SLATFLSQNSIPILFPHLFLHSTYPNLAL
Sequences:
>Translated_109_residues MFGDKSYISKDLFHQLLANGLRLFTNLRKDMKTYLLDIDDKHLLNKHSLIQDVFNVLKKHIHLEHTRHYSLINFFVHIIA SLATFLSQNSIPILFPHLFLHSTYPNLAL >Mature_109_residues MFGDKSYISKDLFHQLLANGLRLFTNLRKDMKTYLLDIDDKHLLNKHSLIQDVFNVLKKHIHLEHTRHYSLINFFVHIIA SLATFLSQNSIPILFPHLFLHSTYPNLAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12825; Mature: 12825
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGDKSYISKDLFHQLLANGLRLFTNLRKDMKTYLLDIDDKHLLNKHSLIQDVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IHLEHTRHYSLINFFVHIIASLATFLSQNSIPILFPHLFLHSTYPNLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFGDKSYISKDLFHQLLANGLRLFTNLRKDMKTYLLDIDDKHLLNKHSLIQDVFNVLKKH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IHLEHTRHYSLINFFVHIIASLATFLSQNSIPILFPHLFLHSTYPNLAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA