| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183761
Identifier: 189183761
GI number: 189183761
Start: 901889
End: 902749
Strand: Direct
Name: 189183761
Synonym: OTT_0854
Alternate gene names: NA
Gene position: 901889-902749 (Clockwise)
Preceding gene: 189183757
Following gene: 189183769
Centisome position: 44.89
GC content: 30.31
Gene sequence:
>861_bases ATGCCAAAATCATATAGCCAAGACTTTAGGGAGGAAGTAATAAAATGTGTTAATCAAGGAAAAAGTTGTAATGATGCCTC AGTAAAATTTGATATAGCAGCAAACACAGTAAGAAATTGGTATAAAAGATATAAATCAGAAGGTCATTATAAAGAAAGAG ATTGTCTTGGTAAAAAAGGAAAAATATATAAGATAGAATTTGAAAAATACATTTTGCTAAATCAAAATCTAACTCTGGCA CAAGCAGGAAAACATTTTGGAATTTCAATAAGGGTAGCGAGTTATTATATGAAAAAATTCGGCTATAGTTATAAAAAAAC GTTTACCTACATGGAAGCAAAACCAGAAATAAGAGAAAAATATCAACAAGTGATAAGTGCTATACCTAAGGAAAACTTGG TATACATAAATGAAAGTGGCATTGAAATGTCTATATGCAAGAATAGAGGGTGGAGCAAAAAAGGAACTCATGTAAGCAGC AAAAAGAGTGGTAAATATTACGAGCGTACAAATATTATAGCTGGTTATGTTAATAATAAATCAATCGCACCTATGATATT TAATGGTGCATGTAATACAAGATTATTTGAAGCTTGGGTGCAGCAGGTATTAATTAATGAGTTAAAGCCTGCTCAGTTTG TAGTAATAGATAATGCTGCGTTTCATAAGTCTAAAAAAACTAAAGAGTTAATAGAATCTGTTGGTTGTAAAGTTATTTTT CTTCCACCTTATTCTCCAGATTTAAATCCGATAGAAAAGTTTTCGGCTAATATGAAGCGGTGGATTAGACATCAAATTAC TCAATTTGCTAAATCTTATGATTCTATTATCTCTTTTTTCTATGCTCAAACTTCATTGTAA
Upstream 100 bases:
>100_bases AAAATCTGTACATATTACTTGGTGCATTTTATTGTCTACCACTATTTGAGTTTTTATAGTCATTTACAATGAAGTTTGAG CATAGTATTCTGAAAAGAAA
Downstream 100 bases:
>100_bases ATGACTATAGTAGCCATATCATAATTTTTAATCAGATCTTGATGTTTTCCTAATTTCTCAAAAATCATTCCTTTGATATA ATAAGCATCTGAGCAATTTG
Product: transposase
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Transposase IS; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; Degenerate Transposase; Transposase Family Protein; Transposase Of IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDCLGKKGKIYKIEFEKYILLNQNLTLA QAGKHFGISIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVISAIPKENLVYINESGIEMSICKNRGWSKKGTHVSS KKSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL
Sequences:
>Translated_286_residues MPKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDCLGKKGKIYKIEFEKYILLNQNLTLA QAGKHFGISIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVISAIPKENLVYINESGIEMSICKNRGWSKKGTHVSS KKSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL >Mature_285_residues PKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDCLGKKGKIYKIEFEKYILLNQNLTLAQ AGKHFGISIRVASYYMKKFGYSYKKTFTYMEAKPEIREKYQQVISAIPKENLVYINESGIEMSICKNRGWSKKGTHVSSK KSGKYYERTNIIAGYVNNKSIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIFL PPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33170; Mature: 33038
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDCLGKKG CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCC KIYKIEFEKYILLNQNLTLAQAGKHFGISIRVASYYMKKFGYSYKKTFTYMEAKPEIREK CEEEEEEEEEEEECCCEEHHHCCCCCEEEEHHHHHHHHHHCCCHHHHEEEECCCHHHHHH YQQVISAIPKENLVYINESGIEMSICKNRGWSKKGTHVSSKKSGKYYERTNIIAGYVNNK HHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCC SIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHCCCEEEE LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKSYSQDFREEVIKCVNQGKSCNDASVKFDIAANTVRNWYKRYKSEGHYKERDCLGKKG CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCC KIYKIEFEKYILLNQNLTLAQAGKHFGISIRVASYYMKKFGYSYKKTFTYMEAKPEIREK CEEEEEEEEEEEECCCEEHHHCCCCCEEEEHHHHHHHHHHCCCHHHHEEEECCCHHHHHH YQQVISAIPKENLVYINESGIEMSICKNRGWSKKGTHVSSKKSGKYYERTNIIAGYVNNK HHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCC SIAPMIFNGACNTRLFEAWVQQVLINELKPAQFVVIDNAAFHKSKKTKELIESVGCKVIF CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHCCCEEEE LPPYSPDLNPIEKFSANMKRWIRHQITQFAKSYDSIISFFYAQTSL ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA