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The map label for this gene is intB [H]

Identifier: 189183769

GI number: 189183769

Start: 908934

End: 909791

Strand: Direct

Name: intB [H]

Synonym: OTT_0862

Alternate gene names: 189183769

Gene position: 908934-909791 (Clockwise)

Preceding gene: 189183761

Following gene: 189183770

Centisome position: 45.24

GC content: 29.95

Gene sequence:

>858_bases
ATGGAATCAATAATATTAACATTAAAGTTAACAGATAAGTTAATAAGAAAAATAAAAATTCCGACTGAAAGAACATCAAC
CATCAAGGATAAAATTGAACCAGGACTTCAACTAAGAATATCACCGACAGGAAGAAAAACATGGTCTTTTGAAAAAAAAT
TTAGAAAAGAAGGGATAAAAATGACGATAGGTGTATTTCCAGATTTATCTATTAAAGAAGCTAGAAAAATAGCAAGAGAA
TTAAAGAGATTAATGGCGAAAGGAATAGATCCAAGAGAAGCAAAACGTCAACAACAGATAGCAGAAGATGAGAAACGTCT
AAAAGCAAGACAAGATATTACATTCAAAGAGCTGTTTTATAAGTATATTGAAGAGTATGCCAAAATATATACTATACACT
GGCAGAGAGAAACTGCAAGAATACATAATTATGGGAAATCGTTATTTTTAAAAAAGATAAGTGATATTAAAAGTAATGAT
ATTGAACAAATATTCAATGATATCAGCAAAGAGGGAAAATATGCGACAGCAAATCGATTTCTAATAACCTTAAGCAGTAT
ATTTAATAAGGCAATAAAATGGGAATTAATAGACAGAAATCCTACACTAAAAATAGATAAACACAAAATGCAAGCAAGAG
AAAGACGTCTAAGTTACGATGAAATGACTAAATTTTTACAAGTATTATGTGGAGAAGCGACTCCGTTGACAAGAGATTTT
GCATTACTAGCGTTATATACTGGAGCTAGAAAAAGGAATGTGTTAGAGATGGAATGGGACAATATAGATTTTGTAAGAAA
AATATGGCATATACCAAAAACTAAGAATGGAAAGGCAAAATATACCATTAACAGATGA

Upstream 100 bases:

>100_bases
TTAGTATAAAAATTTTATTCAAATAAAGAGAATAATATAGATACCTTGTTTAGGTAATTGTAATATAAATTAATATAACA
ATTCAATATGTGGAGTAATT

Downstream 100 bases:

>100_bases
GATAATAGAAATATTGCAAGCAAGGAAATTAACATCTAAAAGTAAATGGGTGCTATCAACTGATAGAAGCAAAAGCTGGC
ACTTGGAAAATCCTTATAGA

Product: putative integrase

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MESIILTLKLTDKLIRKIKIPTERTSTIKDKIEPGLQLRISPTGRKTWSFEKKFRKEGIKMTIGVFPDLSIKEARKIARE
LKRLMAKGIDPREAKRQQQIAEDEKRLKARQDITFKELFYKYIEEYAKIYTIHWQRETARIHNYGKSLFLKKISDIKSND
IEQIFNDISKEGKYATANRFLITLSSIFNKAIKWELIDRNPTLKIDKHKMQARERRLSYDEMTKFLQVLCGEATPLTRDF
ALLALYTGARKRNVLEMEWDNIDFVRKIWHIPKTKNGKAKYTINR

Sequences:

>Translated_285_residues
MESIILTLKLTDKLIRKIKIPTERTSTIKDKIEPGLQLRISPTGRKTWSFEKKFRKEGIKMTIGVFPDLSIKEARKIARE
LKRLMAKGIDPREAKRQQQIAEDEKRLKARQDITFKELFYKYIEEYAKIYTIHWQRETARIHNYGKSLFLKKISDIKSND
IEQIFNDISKEGKYATANRFLITLSSIFNKAIKWELIDRNPTLKIDKHKMQARERRLSYDEMTKFLQVLCGEATPLTRDF
ALLALYTGARKRNVLEMEWDNIDFVRKIWHIPKTKNGKAKYTINR
>Mature_285_residues
MESIILTLKLTDKLIRKIKIPTERTSTIKDKIEPGLQLRISPTGRKTWSFEKKFRKEGIKMTIGVFPDLSIKEARKIARE
LKRLMAKGIDPREAKRQQQIAEDEKRLKARQDITFKELFYKYIEEYAKIYTIHWQRETARIHNYGKSLFLKKISDIKSND
IEQIFNDISKEGKYATANRFLITLSSIFNKAIKWELIDRNPTLKIDKHKMQARERRLSYDEMTKFLQVLCGEATPLTRDF
ALLALYTGARKRNVLEMEWDNIDFVRKIWHIPKTKNGKAKYTINR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=252, Percent_Identity=23.8095238095238, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI145693166, Length=197, Percent_Identity=27.9187817258883, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33814; Mature: 33814

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIILTLKLTDKLIRKIKIPTERTSTIKDKIEPGLQLRISPTGRKTWSFEKKFRKEGIK
CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCE
MTIGVFPDLSIKEARKIARELKRLMAKGIDPREAKRQQQIAEDEKRLKARQDITFKELFY
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KYIEEYAKIYTIHWQRETARIHNYGKSLFLKKISDIKSNDIEQIFNDISKEGKYATANRF
HHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHH
LITLSSIFNKAIKWELIDRNPTLKIDKHKMQARERRLSYDEMTKFLQVLCGEATPLTRDF
HHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
ALLALYTGARKRNVLEMEWDNIDFVRKIWHIPKTKNGKAKYTINR
HHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure
MESIILTLKLTDKLIRKIKIPTERTSTIKDKIEPGLQLRISPTGRKTWSFEKKFRKEGIK
CCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCE
MTIGVFPDLSIKEARKIARELKRLMAKGIDPREAKRQQQIAEDEKRLKARQDITFKELFY
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KYIEEYAKIYTIHWQRETARIHNYGKSLFLKKISDIKSNDIEQIFNDISKEGKYATANRF
HHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEHHHH
LITLSSIFNKAIKWELIDRNPTLKIDKHKMQARERRLSYDEMTKFLQVLCGEATPLTRDF
HHHHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH
ALLALYTGARKRNVLEMEWDNIDFVRKIWHIPKTKNGKAKYTINR
HHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]