| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183749
Identifier: 189183749
GI number: 189183749
Start: 887604
End: 887975
Strand: Reverse
Name: 189183749
Synonym: OTT_0842
Alternate gene names: NA
Gene position: 887975-887604 (Counterclockwise)
Preceding gene: 189183755
Following gene: 189183748
Centisome position: 44.2
GC content: 29.3
Gene sequence:
>372_bases TTGTCCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGCAAGGATTGTAAAAATTATTATCTATA TTACTTGAGTTATAAGTATAAAGGATACTTTTGCTTACTAAGCTATAGTAGAATAATACAACTGTGGCCTAGAATGTTGC TACCATTAGTCGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTACATCGATTCTACAAAGTTAGCAATT TGTCATAACAAACGCATTTCCAGTAATAGAGTTTTCAACAGAATTTCTAAAATTGGTAAGAGTAGTTATAGCTGGTTCTT AGGCTTTAAGCTTCATCTTGTAATTAATAATAAAGGTGAAATAAAATGTTAG
Upstream 100 bases:
>100_bases CGGTATACTATTTAATAGACAATTTTTGCAAGATATATCACGAGTTGGAGAGAAAGAGATTAATACCAAGTAGAGTAATC AAAGGAACAGAGATGGGAAG
Downstream 100 bases:
>100_bases TTAAATTTACTAAATGTAATAAAAGCACCCTAATCTGTATCTTCAGTTTTTTCTAAATGCTTATCTGGTAAATTGTTTGG TGATAAAGCTTACATATCTA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLLSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAI CHNKRISSNRVFNRISKIGKSSYSWFLGFKLHLVINNKGEIKC
Sequences:
>Translated_123_residues MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLLSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAI CHNKRISSNRVFNRISKIGKSSYSWFLGFKLHLVINNKGEIKC >Mature_122_residues SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLLSYSRIIQLWPRMLLPLVVLMHYLKGEETGIYYIDSTKLAIC HNKRISSNRVFNRISKIGKSSYSWFLGFKLHLVINNKGEIKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14583; Mature: 14451
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLLSYSRIIQLWPRMLLPLVVLM CCHHHHHHHHHHHHCCCCHHCCCEEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKRISSNRVFNRISKIGKSSYSWFLGFKLHLVINNKGE HHHCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCC IKC CCC >Mature Secondary Structure SLAELLTIAIYFYVSPCKDCKNYYLYYLSYKYKGYFCLLSYSRIIQLWPRMLLPLVVLM CHHHHHHHHHHHHCCCCHHCCCEEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHHH HYLKGEETGIYYIDSTKLAICHNKRISSNRVFNRISKIGKSSYSWFLGFKLHLVINNKGE HHHCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCC IKC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA